Orthologous Gene Search

  Genes that are duplicated as concomitant events of species formation and continue to have the same function are called orthologous genes. New gene functions can be caused by duplications that occur within the genome of a single species. Duplications within a genome result in paralogous gene.
  Orthogroups, orthologs and paralogs genes were identified using OrthoFinder (v2.5.1). First, the similarity relationship between protein sequences of all species was based on the Blastp similarity score (E-value 51e-5). The sequence alignment program was blast_gz and the conformational tree method was FastTree. MCL graph clustering algorithm (Inflation value >1.5) was used for cluster analysis to obtain single-copy and multi-copy gene families.
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Select Orthogroup Total Tree Image Download Acco Accr Adu Aed Aev Ahy Aip Alju Amo Apr Arst Bach Bisa Bva Car Cca Dere Dod Enph Eupl Glsi Gma Gso Lal Lan Lapu Lasa Lele Lja Mal Mepo Mesa Mibi Mtr Phac Phco Prci Psa Pste Pte Pumo Pvu Rops Seca Spst Ssu Sto Tpr Trre Tsu Vian Vifa Vimu Viun Vivi Vra Vvi
OG0000080 875 19 28 12 2 8 25 12 14 17 11 17 23 16 22 6 8 14 1 2 19 16 14 21 0 16 8 19 49 14 20 5 92 14 18 0 11 19 20 1 6 10 12 18 6 2 3 11 15 36 20 9 22 17 10 20 12 13
OG0000081 867 15 17 10 8 10 23 9 15 20 14 12 9 10 10 12 12 10 9 9 9 10 20 20 9 13 13 20 26 9 12 14 63 15 18 12 11 16 15 11 8 14 12 12 31 12 12 8 23 49 14 12 13 15 15 32 8 7
OG0000082 856 18 11 10 15 11 26 14 13 22 12 14 23 13 22 8 16 10 9 10 9 11 15 15 10 9 13 12 36 9 12 16 76 13 16 11 10 18 9 8 9 11 11 5 24 13 16 5 11 28 11 9 13 13 15 22 8 27
OG0000083 852 3 4 8 6 6 23 15 5 22 6 13 29 11 12 17 5 8 4 5 0 5 9 9 6 9 7 27 7 9 29 6 96 1 30 7 7 2 13 3 10 12 7 19 19 7 11 6 45 65 37 11 19 19 20 49 11 1
OG0000084 852 22 31 9 10 12 19 15 14 15 9 10 12 32 16 10 14 9 11 8 15 19 11 11 4 4 7 8 43 6 13 11 49 33 15 7 9 24 10 6 7 15 8 13 29 6 20 9 7 44 13 6 30 7 7 17 6 25
OG0000085 837 7 10 3 10 4 11 3 1 3 15 7 8 0 25 20 2 2 9 20 0 0 5 3 3 3 4 5 7 4 17 37 149 2 37 19 11 24 15 11 0 16 18 29 10 3 7 26 31 33 29 7 9 23 19 51 10 0
OG0000086 836 3 1 21 39 1 51 28 11 36 4 36 32 0 24 4 18 5 10 2 0 7 13 16 0 0 28 1 29 1 6 3 15 15 3 36 19 25 3 13 0 30 18 11 13 10 10 0 3 8 3 19 0 39 83 4 26 0
OG0000087 834 11 14 10 3 11 21 11 15 15 8 12 12 11 13 9 9 11 6 1 14 16 15 17 16 17 10 28 22 23 27 16 66 8 21 8 9 11 26 9 11 14 10 11 26 11 11 6 24 19 16 6 25 7 12 28 7 8
OG0000088 832 9 2 29 7 7 75 30 13 27 13 20 21 10 6 4 1 14 2 0 0 6 0 20 0 0 10 3 2 1 7 15 132 12 34 1 2 24 0 7 0 13 21 5 20 5 2 6 27 3 37 8 15 29 18 28 14 15
OG0000089 830 18 14 12 12 11 23 13 17 17 11 12 7 20 17 10 11 16 7 13 9 19 22 21 13 13 11 16 54 10 11 12 49 16 11 11 8 16 1 11 20 11 11 13 21 11 9 10 12 23 11 11 15 11 12 17 11 6
   
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