Orthologous Gene Search

  Genes that are duplicated as concomitant events of species formation and continue to have the same function are called orthologous genes. New gene functions can be caused by duplications that occur within the genome of a single species. Duplications within a genome result in paralogous gene.
  Orthogroups, orthologs and paralogs genes were identified using OrthoFinder (v2.5.1). First, the similarity relationship between protein sequences of all species was based on the Blastp similarity score (E-value 51e-5). The sequence alignment program was blast_gz and the conformational tree method was FastTree. MCL graph clustering algorithm (Inflation value >1.5) was used for cluster analysis to obtain single-copy and multi-copy gene families.
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Select Orthogroup Total Tree Image Download Acco Accr Adu Aed Aev Ahy Aip Alju Amo Apr Arst Bach Bisa Bva Car Cca Dere Dod Enph Eupl Glsi Gma Gso Lal Lan Lapu Lasa Lele Lja Mal Mepo Mesa Mibi Mtr Phac Phco Prci Psa Pste Pte Pumo Pvu Rops Seca Spst Ssu Sto Tpr Trre Tsu Vian Vifa Vimu Viun Vivi Vra Vvi
OG0000090 829 11 12 16 10 5 29 13 15 15 10 16 18 14 16 11 12 22 5 1 3 0 20 20 13 12 16 17 19 4 12 13 50 5 11 13 13 17 12 9 22 30 13 18 31 16 13 11 11 26 10 10 11 11 16 17 10 23
OG0000091 827 0 44 10 0 2 76 1 0 99 1 23 1 0 1 0 0 0 0 0 1 0 6 33 4 2 0 47 0 29 58 1 91 0 41 0 0 0 1 0 0 0 0 0 3 0 0 0 17 4 41 0 49 0 0 141 0 0
OG0000092 818 11 8 9 2 1 17 11 9 13 13 8 0 6 3 17 17 2 8 3 0 17 9 22 6 4 14 16 2 6 18 9 106 10 20 25 7 5 12 16 1 25 25 12 37 17 2 3 23 6 26 18 24 33 21 27 25 11
OG0000093 816 7 19 19 18 7 25 16 11 14 9 17 3 21 9 15 14 12 14 8 0 12 20 22 2 2 11 7 20 10 12 15 57 9 13 15 14 13 9 8 1 15 18 10 21 10 9 18 12 45 21 16 7 21 19 12 15 17
OG0000094 815 0 0 10 9 5 25 16 0 18 2 8 0 0 0 5 10 0 0 0 0 0 1 0 1 0 0 30 0 9 111 61 2 0 84 16 0 0 29 3 0 32 16 0 2 1 2 0 68 5 79 4 35 14 9 91 1 1
OG0000095 813 2 3 9 4 16 17 12 4 8 6 8 5 6 8 11 14 7 13 4 2 4 15 15 23 18 14 11 12 25 33 20 115 6 21 10 9 6 9 5 1 22 10 28 8 9 3 3 21 58 19 9 8 10 11 58 2 3
OG0000096 812 14 30 8 11 10 16 10 18 14 10 11 7 9 21 8 8 11 11 3 5 14 7 14 5 6 10 14 31 11 17 11 79 19 16 15 16 17 9 10 7 18 20 17 19 9 2 9 8 38 9 13 5 10 13 23 9 27
OG0000097 809 25 34 9 9 10 15 6 23 8 10 8 2 10 11 7 6 11 12 13 3 13 17 10 11 6 12 15 52 16 13 13 39 31 11 20 9 31 11 6 4 6 10 17 35 3 13 5 12 26 9 8 11 16 15 33 3 15
OG0000098 791 6 6 16 11 19 31 16 6 20 9 14 20 15 10 10 9 11 3 7 4 15 6 12 9 11 14 11 15 6 8 12 50 11 10 13 11 10 13 12 3 28 16 14 22 10 3 10 19 28 13 15 19 23 20 13 17 26
OG0000099 784 8 10 11 10 11 23 13 11 13 10 13 17 13 14 9 9 12 10 11 16 12 23 17 17 17 11 11 37 11 9 11 59 10 10 11 14 14 6 9 12 10 14 11 21 9 12 9 12 20 13 8 9 11 19 16 8 17
   
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