Orthologous Gene Search

  Genes that are duplicated as concomitant events of species formation and continue to have the same function are called orthologous genes. New gene functions can be caused by duplications that occur within the genome of a single species. Duplications within a genome result in paralogous gene.
  Orthogroups, orthologs and paralogs genes were identified using OrthoFinder (v2.5.1). First, the similarity relationship between protein sequences of all species was based on the Blastp similarity score (E-value 51e-5). The sequence alignment program was blast_gz and the conformational tree method was FastTree. MCL graph clustering algorithm (Inflation value >1.5) was used for cluster analysis to obtain single-copy and multi-copy gene families.
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Select Orthogroup Total Tree Image Download Acco Accr Adu Aed Aev Ahy Aip Alju Amo Apr Arst Bach Bisa Bva Car Cca Dere Dod Enph Eupl Glsi Gma Gso Lal Lan Lapu Lasa Lele Lja Mal Mepo Mesa Mibi Mtr Phac Phco Prci Psa Pste Pte Pumo Pvu Rops Seca Spst Ssu Sto Tpr Trre Tsu Vian Vifa Vimu Viun Vivi Vra Vvi
OG0000040 1150 18 21 4 28 5 11 4 14 15 5 4 8 3 1 7 14 7 2 5 1 2 16 16 7 7 13 13 17 10 30 39 200 18 37 15 14 14 18 5 0 62 17 13 29 9 11 9 37 117 14 13 16 13 40 69 9 4
OG0000041 1138 0 0 64 6 15 103 129 0 74 5 54 0 0 0 9 14 0 1 0 0 0 43 13 206 4 0 8 0 13 83 1 12 0 18 0 0 0 2 1 0 2 0 8 138 0 2 1 17 16 33 0 6 0 0 37 0 0
OG0000042 1130 64 54 33 1 43 68 2 40 18 4 39 15 11 21 2 7 4 0 48 5 5 15 4 11 5 0 7 44 58 22 2 27 26 1 1 0 18 34 7 0 0 1 33 67 0 0 69 22 71 27 0 16 0 0 56 0 2
OG0000043 1123 0 6 9 0 13 39 15 0 14 15 15 21 0 24 0 3 1 0 0 10 0 0 94 39 113 3 5 1 0 66 0 23 0 22 0 1 7 9 18 0 0 1 12 0 3 0 36 50 42 96 3 13 33 44 146 58 0
OG0000044 1117 14 15 9 7 8 22 12 12 19 16 12 23 11 42 17 8 8 6 5 3 5 19 38 15 11 23 26 11 21 17 19 96 17 19 20 20 11 10 15 18 19 25 26 52 24 18 13 17 34 20 19 36 19 25 54 7 9
OG0000045 1111 22 37 9 3 17 25 10 17 12 15 15 6 9 17 14 27 18 13 17 2 19 17 27 8 10 16 14 48 16 16 20 93 23 21 22 24 25 12 11 2 21 22 16 42 10 18 14 19 52 18 13 14 19 26 34 19 5
OG0000046 1097 10 2 21 19 9 48 19 20 14 21 30 22 26 7 3 1 3 3 1 1 0 7 67 0 1 27 3 2 3 17 15 147 19 29 19 23 18 6 13 3 15 29 12 23 20 0 5 13 4 14 18 3 76 79 24 53 10
OG0000047 1091 32 24 14 17 10 34 23 28 31 12 23 21 31 19 2 13 22 6 9 7 16 9 21 3 3 11 3 50 5 26 11 89 23 24 25 4 77 6 16 2 14 31 10 29 9 3 26 15 54 10 9 3 8 21 11 14 22
OG0000048 1086 34 72 18 6 14 66 4 25 19 2 29 5 7 0 0 4 11 0 22 4 17 0 2 5 7 0 17 24 1 27 0 64 33 5 1 0 8 16 1 0 0 1 14 315 0 0 51 11 29 21 0 9 0 0 65 0 0
OG0000049 1076 12 15 24 1 9 58 22 10 19 24 31 15 16 14 15 16 7 12 1 2 10 22 20 10 7 18 12 9 17 34 26 85 6 36 19 12 2 16 9 10 25 14 38 46 13 10 8 33 13 25 9 17 10 33 50 9 20
   
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