Orthologous Gene Search

  Genes that are duplicated as concomitant events of species formation and continue to have the same function are called orthologous genes. New gene functions can be caused by duplications that occur within the genome of a single species. Duplications within a genome result in paralogous gene.
  Orthogroups, orthologs and paralogs genes were identified using OrthoFinder (v2.5.1). First, the similarity relationship between protein sequences of all species was based on the Blastp similarity score (E-value 51e-5). The sequence alignment program was blast_gz and the conformational tree method was FastTree. MCL graph clustering algorithm (Inflation value >1.5) was used for cluster analysis to obtain single-copy and multi-copy gene families.
Valid last name is required.
    
Valid last name is required.
Select Orthogroup Total Tree Image Download Acco Accr Adu Aed Aev Ahy Aip Alju Amo Apr Arst Bach Bisa Bva Car Cca Dere Dod Enph Eupl Glsi Gma Gso Lal Lan Lapu Lasa Lele Lja Mal Mepo Mesa Mibi Mtr Phac Phco Prci Psa Pste Pte Pumo Pvu Rops Seca Spst Ssu Sto Tpr Trre Tsu Vian Vifa Vimu Viun Vivi Vra Vvi
OG0000030 1320 21 25 18 17 19 41 20 19 28 21 20 27 15 28 15 8 19 18 9 7 18 28 28 18 18 20 22 53 18 21 12 100 20 25 22 18 14 13 24 22 16 24 20 44 23 12 17 23 43 18 19 27 20 22 31 20 32
OG0000031 1301 20 23 31 24 14 65 29 20 36 12 35 39 8 13 10 2 33 9 7 9 8 10 25 9 11 14 22 53 11 22 17 100 33 20 11 10 29 0 22 16 25 19 32 56 21 17 27 23 56 20 12 5 25 23 14 19 25
OG0000032 1228 20 25 20 30 14 43 28 18 40 12 21 41 27 55 4 11 15 19 7 40 19 22 20 2 3 12 8 39 12 23 11 100 9 18 14 15 25 8 17 1 4 15 28 61 12 14 9 21 53 16 15 15 17 18 17 7 38
OG0000033 1205 4 10 3 0 0 139 6 5 24 65 202 9 0 28 0 1 0 0 0 0 0 1 100 5 40 4 0 1 0 4 0 1 1 28 0 2 26 0 3 0 0 0 68 23 0 0 5 35 21 147 7 1 21 23 107 35 0
OG0000034 1195 11 16 6 23 5 36 28 16 30 10 17 12 13 20 7 8 9 1 3 4 9 13 12 6 5 16 10 24 14 19 17 166 22 34 32 27 22 8 11 6 13 41 11 22 16 10 16 22 46 27 18 9 39 39 29 32 57
OG0000035 1171 13 35 19 10 10 58 23 7 36 13 48 14 7 19 6 5 3 13 4 0 2 26 25 3 5 5 10 13 20 35 26 138 4 50 22 15 46 3 32 0 59 12 27 53 14 7 2 20 41 22 6 6 8 29 35 5 2
OG0000036 1169 0 0 0 0 2 4 2 0 7 28 0 11 0 26 0 0 0 0 1 1 0 0 205 41 54 10 0 0 0 59 0 2 0 50 0 0 50 0 13 0 0 1 159 13 2 0 7 9 60 42 6 13 2 36 214 9 30
OG0000037 1164 0 7 0 0 27 98 0 0 5 42 40 4 0 2 2 0 0 0 2 0 0 5 43 131 48 0 231 0 2 46 1 2 0 39 2 1 3 0 4 0 0 57 11 4 0 0 80 21 6 12 0 2 22 51 99 12 0
OG0000038 1161 18 16 16 16 17 32 16 18 23 19 19 18 20 18 17 15 19 7 19 12 21 33 32 21 23 18 15 51 17 16 17 68 16 17 22 18 24 4 7 24 18 18 23 39 20 19 14 22 31 17 18 15 19 22 22 14 11
OG0000039 1154 15 52 3 4 4 31 6 17 29 5 17 1 19 20 8 7 18 20 3 1 26 18 26 5 8 15 14 25 11 28 53 56 29 28 14 18 60 29 11 11 41 12 53 42 18 31 3 14 28 22 6 7 15 34 22 11 30
   
First Previous Page 4 of 10 Next Last