Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0502 ATGGCGGAAGAATCGGAGCACACTGCAGCACCGGCGACTGGGGAATCGTTGCTCGACAAGATCGCCGAGAAGCTCCATGGTCATGGCCATGACTCTTCCTCTTCTTCGGATTCCGATTCCGACAATAAGGAATCTTCCTCGATCAATGATACTTCCTCGATCAAGGATAAGGTTTTCCGTCTCTTCGGGAGGGAGAAGCCCGTTCACTCCGTCCTAGGCGGCGGAAAGCCTGCTGATGTGCTGTTGTGGAGGAACAAGAAGATATCTGCTAGTGTACTTGCTGTAGCAACAGCTGTTTGGATCTTTTTTGAGTTGCTTGAATATCATCTGCTTACGCTAGTCGGCCACATTTTAATTCTCTTGCTTGCGGTTTTGTTTTTGTGGTCCAATGCCCATACATTTATTCACAAGGCACCACCTCGCATCCCAGTTGTTCATCTTTCTGAAGAACCTTTTCTTCAATTTGCATCTGCATTGACAATTGAACTCAATCGCGGATTTGCTGCCTTGCATGCTATCGGTTCTGGAAGAGATTTGAAGACATTCCTCATCGTTATTGTTAGCACATGGATTCTATCAATTGTGGGAAGCTGGGTCAATTTCTTGACCTTGTTCTACATTGTCTTTGTTTTGTTGCATACGGTTCCTGTCATTTATGATAAGTATGAAGACAAGATAGACCCTCTGGCAGAGAAGGGATTGATCGAGTTCAAAAAACAGTATGCTGTGTTTGACGAGAAAGTGTTGAGTAAGATCCCGAAAGGTCCATTGAAAGGCAAGTTAGCTTAG 789 0.4499 MAEESEHTAAPATGESLLDKIAEKLHGHGHDSSSSSDSDSDNKESSSINDTSSIKDKVFRLFGREKPVHSVLGGGKPADVLLWRNKKISASVLAVATAVWIFFELLEYHLLTLVGHILILLLAVLFLWSNAHTFIHKAPPRIPVVHLSEEPFLQFASALTIELNRGFAALHAIGSGRDLKTFLIVIVSTWILSIVGSWVNFLTLFYIVFVLLHTVPVIYDKYEDKIDPLAEKGLIEFKKQYAVFDEKVLSKIPKGPLKGKLA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0502 262 ProSiteProfiles Reticulon domain profile. 77 262 IPR003388 -
Vra9g0502 262 MobiDBLite consensus disorder prediction 26 49 - -
Vra9g0502 262 PANTHER RETICULON 1 261 IPR045064 GO:0009617
Vra9g0502 262 PANTHER RETICULON-LIKE PROTEIN 1 261 - -
Vra9g0502 262 Pfam Reticulon 78 232 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0502 Vra-Chr9 5307671 5309941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0502 - - gmx:100796111 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0502 9 5307671 5309941 Vra8g2188 8 40270865 40273435 ECH
Vra9g0502 9 5307671 5309941 Vra9g0502 9 5307671 5309941 ECH
Vra4g0899 4 16043632 16048571 Vra9g0502 9 5307671 5309941 PCT