Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2188 ATGGCGTCAGTGGATACGGATTCCTTCGTTGAAAAGATGGAAGAGAAGTTCCACGACAACAACTCCGATTCCGAATCATATTCCGATTCCGACGACGACCACGCCAATAAGCCTCCGCTCAAGGCTTCCGGATCCAACGTTTACCGCCTGTTCGGCCGAGAACAGCCCGTCCATAAGGTCCTCGGCGGTGGAAAACCTGCCGATATTTTGCTATGGAGGAATCGGAGAACCACAGGAATTGCACTTGGTGCTGGCACTGCCGTTTGGGTTTTCTTTCAGATGATGGAATACCACCTGATAACTTTCATTTGCCATTTATTGATTATGCTTCTCGGTGCACTTTTCTTGTGGTCCAATGCATCTGTCTTTATCCACAAGTCTCCACTGCACATCCCGCATGTAGTAATTCCCGAGGATTGCGTTCTTGAGGCTGCTTCTGCTATAAGAATTGAAATTAATCGAGCCTTCGTTCTTTTGCGGGAAATTGGAACAGGGAGAGATTTAAAGAAGTTTCTTAGCGTTATTGCTGTATTATGGGTTATCTCAGTTATTGGGGGTTGGTTCCACTTCTTGACCTTATTTTATCTATTCTATTTGTCACTGTTCACATTGCCACTGCTGTATGAGAAATACGAAGACCAGGTTGATGCAATGGGTGAGAAGGCAATGATTGAGATAAAAAAACAATACGCAGTGTTTGATGCTAAGGTTTTGAGCCAGATACCAATAGCAGGACTCAAAAAAGATTAG 750 0.444 MASVDTDSFVEKMEEKFHDNNSDSESYSDSDDDHANKPPLKASGSNVYRLFGREQPVHKVLGGGKPADILLWRNRRTTGIALGAGTAVWVFFQMMEYHLITFICHLLIMLLGALFLWSNASVFIHKSPLHIPHVVIPEDCVLEAASAIRIEINRAFVLLREIGTGRDLKKFLSVIAVLWVISVIGGWFHFLTLFYLFYLSLFTLPLLYEKYEDQVDAMGEKAMIEIKKQYAVFDAKVLSQIPIAGLKKD* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2188 249 MobiDBLite consensus disorder prediction 15 38 - -
Vra8g2188 249 MobiDBLite consensus disorder prediction 15 41 - -
Vra8g2188 249 Pfam Reticulon 67 221 IPR003388 -
Vra8g2188 249 PANTHER RETICULON 2 247 IPR045064 GO:0009617
Vra8g2188 249 ProSiteProfiles Reticulon domain profile. 66 249 IPR003388 -
Vra8g2188 249 PANTHER RETICULON-LIKE PROTEIN 2 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2188 Vra-Chr8 40270865 40273435 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2188 - K20721 gmx:100790190 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0502 9 5307671 5309941 Vra8g2188 8 40270865 40273435 ECH
Vra8g2188 8 40270865 40273435 Vra8g2188 8 40270865 40273435 ECH