Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0229 ATGTCTGGAATTGTGGTTGTTTTCGACTTTGACAAGACCATTGTCGATGTTGACAGCGACAACTGGGTCATCGACGAATTGGGTTTCACAGATTTGTTCAACCAACTCCTTCCCACGATGCCTTGGAACACTCTCATGGACAAGATGATGATGGAGCTTCACACACACGGTAAAACCATTAAGGATATTGAAGAGGTTCTGCATAAGATTCCATTGAACCCCAGAGTAGTACCAGCTGTTAAAGCAGCTCATTCTTTAGGGTGTGATTTGAGGATTGTGAGTGATGCAAACATGTTTTTCATTGAGTCAATTTTGAAGCACTTAGGAATAAGGGAATATTTCTCAGAGATCAATACTAACCCCAGTTATGTGAATGAAGAAGGAAGGTTAAGGATTCTACCTTACCATGATTTCAACAAAGCTTCTCATGGCTGTAGTTTGTGTCCTCCAAACATGTGTAAGGGTTTAGTGATAGAGAGAATTGAAGATTCAATATCAGAAGAGGATAAGAGATTGATCTATCTTGGAGATGGAAGTGGAGACTATTGTCCAAGTTTGAGGTTGAAAGAGAAGGACTTTATGATGCCAAGGAAGAATTTTCCGGTGTGGGATTTGATATGCAGAGATCCGTCACTTGTTAAGGCTGAGATTCATGGGTGGAGTGATGGAGAAGAACTTGAACAAGTTTTGCTGTATTTGATCAACAAAGTATCAATGGAGCAAAATTCTTCCTTCATTTCATCTGATTGTAAGCTTCAGACTCTGTCAGTCTCTGCTCATGAGGCTTTGCCCAAAGTTCTACCAGTTCGACCATAG 816 0.4056 MSGIVVVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDKMMMELHTHGKTIKDIEEVLHKIPLNPRVVPAVKAAHSLGCDLRIVSDANMFFIESILKHLGIREYFSEINTNPSYVNEEGRLRILPYHDFNKASHGCSLCPPNMCKGLVIERIEDSISEEDKRLIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICRDPSLVKAEIHGWSDGEELEQVLLYLINKVSMEQNSSFISSDCKLQTLSVSAHEALPKVLPVRP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0229 271 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 269 IPR016965 GO:0016791
Vra9g0229 271 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 186 - -
Vra9g0229 271 Gene3D - 2 188 IPR023214 -
Vra9g0229 271 SUPERFAMILY HAD-like 4 189 IPR036412 -
Vra9g0229 271 PANTHER INORGANIC PYROPHOSPHATASE 1 269 - -
Vra9g0229 271 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Vra9g0229 271 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Vra9g0229 271 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 198 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0229 Vra-Chr9 1655147 1657460 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0229 K13248 - gmx:100782134 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0229 9 1655147 1657460 Vra5g2513 5 32056033 32057777 ECH
Vra9g0229 9 1655147 1657460 Vra9g0229 9 1655147 1657460 ECH
Vra9g0229 9 1655147 1657460 Vra5g2512 5 32051141 32052979 PCT