Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2512 ATGGCTGAAATTGTAGTGGTTTTTGACTTTGACAAGACAATTGTAGACTGTGACAGTGATAACTGGGTTGTTGATGAGTTGGGTTTCAGTGTTCTGTTCAATCGTCTTCTTCCTACCATGCCTTGGAACACTCTCATGGATAAGATGATGATGGAGCTTCATTCCCATGGAAAAACCATTGATGACATTGTGCAAGTTCTTCAGAGGATTCCTATACACCCCAGAATAATCCCTGCCATTAAAGCAGCTCATGCTTTAGGGTGTGATTTGAGGATTGTGAGTGATGCAAACACGTTCTTCATCGAGACAATTTTAGAACACTTAAAAATAAGGGAATGTTTCTCAGATATAAGCTCTAATCCAAGTTATACTAACGAAGATGGAAGGCTGCAAATTTTGCCTTACCATGACTTCAACAAGTTTCCCCATGAATGCACTCTCTGCCCTCCCAACATGTGCAAGGGGAAAATCATAGAGAAAATCCAAGAATCATTAGGAGAAAAGAAGAGATTGATCTATCTTGGGGATGGTAGTGGAGACTATTGCCCAAGCTTGAGGCTGAAAGAACAAGACTTTGTGATGCCAAGAAAGAATTTTCCAGTGTGGGAACTGATATGCAAAGACCCTTTGCTCATTAAAGCTGAAATTCATGAATGGAGCAATGGAGAAGAGCTTGAACGAGTTTCTTTGAGGCTAATCAACAAAATTTGTTCTGCACAAAATGCTGACTTCATTTCATCCAATTGCAAACTGCATGTTATGTGCGTGTTTGGTTCCGATTAA 783 0.3997 MAEIVVVFDFDKTIVDCDSDNWVVDELGFSVLFNRLLPTMPWNTLMDKMMMELHSHGKTIDDIVQVLQRIPIHPRIIPAIKAAHALGCDLRIVSDANTFFIETILEHLKIRECFSDISSNPSYTNEDGRLQILPYHDFNKFPHECTLCPPNMCKGKIIEKIQESLGEKKRLIYLGDGSGDYCPSLRLKEQDFVMPRKNFPVWELICKDPLLIKAEIHEWSNGEELERVSLRLINKICSAQNADFISSNCKLHVMCVFGSD* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2512 260 PANTHER INORGANIC PYROPHOSPHATASE 1 253 - -
Vra5g2512 260 PIRSF PLP_phosphatas_PHOSPHO2 1 237 IPR016965 GO:0016791
Vra5g2512 260 SUPERFAMILY HAD-like 4 188 IPR036412 -
Vra5g2512 260 Pfam Putative Phosphatase 4 232 IPR016965 GO:0016791
Vra5g2512 260 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 253 IPR016965 GO:0016791
Vra5g2512 260 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 185 - -
Vra5g2512 260 Gene3D - 2 187 IPR023214 -
Vra5g2512 260 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 197 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2512 Vra-Chr5 32051141 32052979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2512 K13248 - gmx:100801052 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0229 9 1655147 1657460 Vra5g2512 5 32051141 32052979 PCT