Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0184 ATGGACAGAAACCAATCCCGCAGGCAGATTGCTGCAATGAAACAGTCCCTCTTTGATCAGGGGTTACTGGATGAACAGTTTATCCAACTGGAGGAATTGCAGGATGATGCAAATCCCAACTTCGTTGAGGAAATTGTCACTCTTCACTACCGTGATTCATCACGGCTAATCTCAAGCATAGACCAAGCTCTAAAAGAGAGGAACCCTCTGGATTTTAACAAGCTGGACACTCTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATAGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTTAGGGAATATTGCAGAGCAGGAAATGCAGAAGGATGCATGAGGAGCTTCCAACAGTTGAAGAAAGAATACGCTGCACTTAGAAAGAAACTTGAAGCTTATTTTCAGTTGGCAAGGCAAGCTGGACCCCAGGAAACAGCATGTCGCTCCAAATAA 456 0.4452 MDRNQSRRQIAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLHYRDSSRLISSIDQALKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRAGNAEGCMRSFQQLKKEYAALRKKLEAYFQLARQAGPQETACRSK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0184 151 Gene3D HPT domain 1 147 IPR036641 GO:0000160
Vra9g0184 151 Pfam Hpt domain 50 128 IPR008207 GO:0000160
Vra9g0184 151 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 3 147 - -
Vra9g0184 151 Coils Coil 110 137 - -
Vra9g0184 151 PANTHER - 3 147 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vra9g0184 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
Vra9g0184 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0184 Vra-Chr9 1290483 1292013 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0184 K14490 - gmx:100798055 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0184 9 1290483 1292013 Vra5g2481 5 31782312 31785137 ECH
Vra9g0184 9 1290483 1292013 Vra9g0184 9 1290483 1292013 ECH
Vra9g0184 9 1290483 1292013 Vra5g1004 5 16465489 16467894 ECH
Vra5g2481 5 31782312 31785137 Vra9g0184 9 1290483 1292013 PCT