Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2244 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAATTGGAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGAATGCAATAATGGTATCTCTGGTGCCAGATGATGTTGGTAAGACAACGGTGAAACTAGAGAAAACTGCAGCGCAAGATGGGACCTGCTCGTGGGAAAATCCAATTTTTGAATCCGTTAAACTTGTTAGGGATGCAAAATCAGGCAAAATTCATGAGAAAATCTACCATTTCATTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTTGGAGAGGCCTCAATTGATTTTGCTGATTTTGTTGCAGAAATTGAGCCAATCACAATTTCTCTACCCCTAAAGTTTGCCAATTCAGGCATAGTTTTACACGTCACTATTCAGAACGTGGAAGGATATGCTGCTGAAAGAAATGGGGAAGATAATGGGGCTGAGGAACTTGGCAGTGATAGAAGCTTGAAACACCAGCTGAGCTATGGCAGTACAGACCATGAAAGTTATAATGTTGATGAAAACGAACACATGGCGAGGACCAGATCTGAGTATTCTGAACAAGATGCATCTAATGGCATTAGTCCTGTGCTAGCTTCATGGGAGGATCCTCATAGCTTCAGACAAAATTCAATTCCATCAAAAGGAACTGTTAAAGCCATTGCAACAGAAGCCCAGGTGCATAAGAGGTCAAACACGAACTGGTCAATGGGTTCGGCATCAGATGGAAGTTTAGGTGACTGGACTAACAGCCTGGAAGACAATCCTCCAAGAGAAAGATTACAAGAGCCTTCAAATATTTCCTATGAAAGCCTCAAGAATGAAATTACTTCTTTGAAGAGGCAAGCGGAAGTGTCAGAAATAGAGTTACAATCACTTCGAAAGCAGATAGAAAAAGAAAGCAGTAGGGGACAAAATTTGTCAAGACAAATAATCAGCCTCAGAGAGGAGAGAGATTTGCTCAAAACCAAATACGAGCAACTCAAGTCCCAGCAGAACTTCAGTAATGAGTCCAAAACCTCCAAAACCTCCAAAACCTTGAAGTCTGAGATTGAAGATACTAGGCTTCAGTTAGAGGCAATGAAGGAAGAGCTTGTTTATGAAAAGGAATTGAGTGCCAATCTTCAATTGCAACTGCGGAAGACACAAAACTCAAACTCTGAATTACTTTTGGCTGTGACAGACCTTGAAGCAATGCTGGAACAAAAGGACAAGGAAATATTGGATTTATCTACGAATATAAAATCCCAGAAGACTACTAAAGAGCGTGAAGAGGGCATAGAATTTGACCTCTTGCGGCTAAAAATTGCAGACCAGGATGAAGAAATAGACAATTACTGTAAACAACGCCAAGAGCTCAGTGAGCAAATTAAAGAACTTACTTTGGAGTATGATCTACTTAAGAAGGAAAATGTGGACATATCTTTGAGATTAAAGCAAGATGAAGCACACCACATCAAGTTACAAAATGAACATTCATCTTCTTTAGTTACAATACAACAACTTGAATCCCAGGTAGAGAGATTAGAAGAGAAGCTAAAGGTGCAGGAAGATGAATTTTCAGCATCTCTGGTCTACATAAAGGAACTTGAAGATGAAGTTAAGTCGTTGGAGAAAGAACTGAAAACACAGGCAGAGAAATTTGAAGAAGATCTCCATGTCATGCAATGTGCAAGAACTGAGCAGGAAGAAAGGGCCCTGCAGGCAGAAGAAGCCTTGAGAAAGACAAGACACAACAATGCTGTTGCATCCGACCGTTTTCAGGAGGAATATAGACTGCTTTCTGTTGAAATGGCACAAAAAGTTGAGGAGAATGAAAATTTGACTTTGAAAGCAGTTGCAGAGGCTGATGAGTTGCGGCACCAGAACAAACTTATAGAAGAAATGCTCCATAAATGCAATCAAGAGCTCAGGCTTATCACAGATCAGAATGAAGTGAAAATGAAAGAGCTATTGGACCAAAGAGACTCAAAAGCAAAAATAATAGAACAGATGTCACAAGAACTAGAAGTTAAGTCTAAACAACTTGAGGATGTGCGAAAGCACTATGATGAAAAGGATGCTTCGTTTTCTAAGCAAATTCAAATGCTCAGATCTCAAATTAAAATGTTGATGGAAGATGGTGTATTGTCTGACAAAATAAGGGAGGATGCAAAAACAGCTCAGAAAGGACAACCACTTATGATCTCAAATGACGGGGAGATGATACTTGGCACTCTATTTTCAGAAGTAGAAACCTTTAAGAACCAGCAAATTGAAATAAAACACAGTTTGCATAAAGAACAAATGGAGAAAGAAAGTATGAAGAAACAAATATCTCAATTAGAAGGAGAGTTGAAGAAGAAGGAAGCGGAGTTAAGTACTATGGAAAAGAAGTTCAAGAATAACAAAGGACGAGCTGCAGTTACACATATGAATTTGACATCAAGAGACAATGAAAGTGCGGTGCCTCCAGCTAAAACACATACCAAGAAGTCAAAATCCGAAATGCATAAGGGAAAGGATGCTTCAAGCAAGTCCGAAGGAGGAACAGTAAACAAGTCAGATGAGAGCAAAGTTTGTCAAGCTTCTGGAAGTGAGGGTGAGTGCCTTACAAATGAATTGTTGAATGAAGTTTCGCTACTAAAGGAAAAGAACAAGATCATGGAGAATGAGCTGAAAGACATGGAGGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTGTACGCAATCTCAAGAATGGGAAGAAGAACTAG 2784 0.3951 MFKSWSKKNKIKAVFKLEFQATQVPKMKKNAIMVSLVPDDVGKTTVKLEKTAAQDGTCSWENPIFESVKLVRDAKSGKIHEKIYHFIVSTGSSKSGFLGEASIDFADFVAEIEPITISLPLKFANSGIVLHVTIQNVEGYAAERNGEDNGAEELGSDRSLKHQLSYGSTDHESYNVDENEHMARTRSEYSEQDASNGISPVLASWEDPHSFRQNSIPSKGTVKAIATEAQVHKRSNTNWSMGSASDGSLGDWTNSLEDNPPRERLQEPSNISYESLKNEITSLKRQAEVSEIELQSLRKQIEKESSRGQNLSRQIISLREERDLLKTKYEQLKSQQNFSNESKTSKTSKTLKSEIEDTRLQLEAMKEELVYEKELSANLQLQLRKTQNSNSELLLAVTDLEAMLEQKDKEILDLSTNIKSQKTTKEREEGIEFDLLRLKIADQDEEIDNYCKQRQELSEQIKELTLEYDLLKKENVDISLRLKQDEAHHIKLQNEHSSSLVTIQQLESQVERLEEKLKVQEDEFSASLVYIKELEDEVKSLEKELKTQAEKFEEDLHVMQCARTEQEERALQAEEALRKTRHNNAVASDRFQEEYRLLSVEMAQKVEENENLTLKAVAEADELRHQNKLIEEMLHKCNQELRLITDQNEVKMKELLDQRDSKAKIIEQMSQELEVKSKQLEDVRKHYDEKDASFSKQIQMLRSQIKMLMEDGVLSDKIREDAKTAQKGQPLMISNDGEMILGTLFSEVETFKNQQIEIKHSLHKEQMEKESMKKQISQLEGELKKKEAELSTMEKKFKNNKGRAAVTHMNLTSRDNESAVPPAKTHTKKSKSEMHKGKDASSKSEGGTVNKSDESKVCQASGSEGECLTNELLNEVSLLKEKNKIMENELKDMEERYSEISLKFAEVEGERQQLVMAVRNLKNGKKN* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2244 927 Coils Coil 620 640 - -
Vra8g2244 927 PANTHER BNAC08G20130D PROTEIN 1 927 - -
Vra8g2244 927 MobiDBLite consensus disorder prediction 147 177 - -
Vra8g2244 927 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Vra8g2244 927 Coils Coil 390 417 - -
Vra8g2244 927 MobiDBLite consensus disorder prediction 233 271 - -
Vra8g2244 927 Coils Coil 762 803 - -
Vra8g2244 927 Coils Coil 496 523 - -
Vra8g2244 927 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 927 - -
Vra8g2244 927 Coils Coil 440 481 - -
Vra8g2244 927 MobiDBLite consensus disorder prediction 805 820 - -
Vra8g2244 927 Coils Coil 869 910 - -
Vra8g2244 927 MobiDBLite consensus disorder prediction 183 202 - -
Vra8g2244 927 MobiDBLite consensus disorder prediction 843 857 - -
Vra8g2244 927 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Vra8g2244 927 Coils Coil 652 690 - -
Vra8g2244 927 MobiDBLite consensus disorder prediction 233 255 - -
Vra8g2244 927 MobiDBLite consensus disorder prediction 821 842 - -
Vra8g2244 927 Coils Coil 273 335 - -
Vra8g2244 927 Coils Coil 531 583 - -
Vra8g2244 927 Coils Coil 348 368 - -
Vra8g2244 927 MobiDBLite consensus disorder prediction 800 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2244 Vra-Chr8 40716783 40724503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2244 - - gmx:100806603 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2244 8 40716783 40724503 Vra11g0293 11 2078794 2083928 ECH
Vra8g2244 8 40716783 40724503 Vra8g2244 8 40716783 40724503 ECH
Vra1g1870 1 35671334 35676473 Vra8g2244 8 40716783 40724503 PCT