Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0293 ATGTTTCGTTCTGCGAGATGGAGGAGCGACAAGAACAGGGTCAAAGCAGTTTTCAAGCTGCACTTCCATGCCACCCAGGTGTTTCATTCTGGAATGGATGCATTGGTTCTGTCTATAGTTCCAGGGGACATTGGAAAGCCAACTACGAAATTGGAGAAAGCTGCAGTTCGAGATGGAACTTGCAGATGGGACAATCCGGTGTATGAAACTGTGAAATTTGTTCAGGAGTCTAAGACTGGGAAAATCAGTGATAGAATATATCATTTTTTGGTTTCAACGGGTTTACCAAAAGCTAGTTCCATTGGGGAGGTTTCTATAAACTTTGCTGATTATGTGGAGACCACAAAGCCCTCCTCTGTTTCTCTTCCCATCAGGATTTCTAATTGTGATGCTGTTTTGCATGTATCAATTCAGAGGCTGCAAGAAAACGGTGATCGAAGAGAGGAAGATGAATGCGAAGATTCCAAACTGAAATCCGACGATAGGAGCTCAAGGAACCAATTGAACAACGGCGATACGGATGAAACCACCAAAAGTTATTCTTCTGAAGATGTCTCTGTCAAAGCAATTGTCAATAGAGCTGAATTGAGTTCTAATTACAGGACATCCAGCGGCTCTGATATGACATTGTCAAGTTCTGATGACAGCTCTGGACTCGATACTCCCCGCGAAATTGGAACAAGAAAAAAGAACATCCACCTCAACACCAAAGGGTTTCTTCCAGATCCTGTTCTGCACCATGCTTCAGAACCTCAAAACCTTGCTCTCAATGCCTCAACATCAATGCATGATGTGCATCAGAGATCACACTGGGACTGGACAGCCGGGTCGGAGCACAGGCTAAGTACAGATGATGCAACATATGGTTCTCATCATAATTCTCTTCTAAAGGAAAGCTCCCAACAGCCTTCCCCTTTAGAGATTGAAAGTCTCACAGCTGAACTAGCTGCTTTGGCCAGGCAGGTAGAGGTGTCGGACTTGGAATTACAGACTCTTAGGAAGCAAATTATGAAGGAATGCAAAAGAGGGCAGGATCTTACGAAGGAAATCGTTGTCTTGAAAGGGGAAAGGGATGCATTCAAGACAGAATGTGACAGTCTCAGGTCTTTTCAGAAACGCATGGAAGAGGCCAAAGTGAGAAACAGATCACAGTTGGAAGGTGGAGACCTTCATGCTCTTGTTGAAGAAATAAGAGAAGAATTGGATTATGAGAAAGACCTCAATGCAAATCTCAGGTTACAGTTAAAGAAGATGCAAGAATCTAATGCCGAACTGGTTCTTGCTGTGCAGGACCTGGATGAAATGTTGGAGCAGAAAAATAGTCATATGTGTAACCATTCCTATGCAAACGACCGGGATAAAATTTCAGCGGAGAAAAAGATAAACCTCTCTAAATGTGAATCGGATGATGATGATGAAGAACAGAAAGCATTGGACGAGCTGGTTAAGGAACACGCCGAAGCCAAGGAGACACACTTACTGGAGAAGAAAATAGTAGACCTCTATGGTGAAATAGAGATGTACAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAACAGCTCGCCCTGGACTATGAGATATTGAAGCAGGAAAACCATGGCCTTGCATATAAGCTGGAGCAAAGCGAACTGCAAGACCAGCTGAAAATGCAGTACGAATGTTCATCTTCTCCTTCTGCAATGAATGATATTGAAATCCACATCAAGAATCTGGAAAATCAACTAAAGGAACAATCAGAAGATTTCACAAATTCTCTGGCTACCATCAAGGCACTTGAAACCCATATCAGAAAATTGGAAGAGGAAATGGAGAAGCAAACACAAAGATTTGAAGCTGATCTAGAAGAAGTGACGCGTGACAAAGTTGAACAAGAACAGAGAGCTATCCAAGCGGAGGAAGCTTTTCGAAAGATCAGACTGAAAAATGCTAAAACTGCCGAGAGGCTACAAGAGGAATTCCGAAAGCTCTCCACACAAATGACCTCAACATTTGATGCGAACGAGAAGGCTACCATGAAAGCATTGACAGAAGCGAGTGAAGTGCGTGCACAGAAAAGGGTACAGGAGGAAGAGCTGCATAAAGTCAAAGAAGAACTCGAGTCAACTACTGCTGAGTATGAGGTAAAACTGAACCAACTTTCCAACCAAGTAGATATGATGAAAGGGCAGATACAACAGATGTTGTTGGAAATTGAGGACAAGTCCAAGCAGCTTGAAAAGCAGAAGAAGCACGAGGAACAGGTCAGTAGGGATTTCTCTAATGAGATCGGATTACTAAAAGCTGAGATTGGAAAGCTTAACATGGAGATTTCATGCTTACTTGAGCAAGTAGAAGATAAGGAAATTTTAAAAACTGATTTGGAAATTATGAAGAAATCAGTAGAGGAATTTGAGACACTTTTACAGAAAGGAACTGTGGAAAGAAATGAACTGTTGGCAACAACTGAGTTGTTGAAGAGGGAGGCAGAAGAGTCACTTAATAAGCTAAACAGAATCATCCATCACAAGGATGAAAAAGAAACTGAGGTCAGAGTCTTGCAGTCAGAGTTGGAGGCCGTCAGAGCTCAGTACAATGACCTGAAACACTATTTTTCTAAGGAAGAAGTTGAGAAAGAAAAACTGCTAAAGCAAGTTTTCCAGCTAAAGGCTGAATTGAAGAAGAAAGATGATGCTTTAATCAGCTCCGAGAAGAGGTTCAGGGAAAGTACTGCACGCGCACAACTTACCGATGGAACTAAAAATATTCTAAAGAACAAAAAAACTGCTTCAGTTCCTCAGAATTCAAAGGAAATAGCCACTCTGAAGGAGAAAATAAAAACGCTTGAGGGCTTGATACAGACAAAGGAAACAACCTTGGAAACTTCAACAACTTCATTTTTGCAGAAGGAAAAGGAACTCCAGACCAAAATTGAGGAGCTGGAGAACAGAGTAGAGGAATTCAACCGAAGTGTTGCTTTGCAGAAGGTGGTTCAGGATAGAAGTTTTACTACTTCCAATGAGATATCTACTGAGCTAACATCTTTGAAGGAAAGAAACAAATCAATGGAAAGCGAACTTAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAATTTTGCGGAGGTAGAAGGTGAAAGACAAAAGCTTGTCATGGCTGTACGGAATCTCAAGAGTACCCAGAAAGGCTAA 3174 0.4184 MFRSARWRSDKNRVKAVFKLHFHATQVFHSGMDALVLSIVPGDIGKPTTKLEKAAVRDGTCRWDNPVYETVKFVQESKTGKISDRIYHFLVSTGLPKASSIGEVSINFADYVETTKPSSVSLPIRISNCDAVLHVSIQRLQENGDRREEDECEDSKLKSDDRSSRNQLNNGDTDETTKSYSSEDVSVKAIVNRAELSSNYRTSSGSDMTLSSSDDSSGLDTPREIGTRKKNIHLNTKGFLPDPVLHHASEPQNLALNASTSMHDVHQRSHWDWTAGSEHRLSTDDATYGSHHNSLLKESSQQPSPLEIESLTAELAALARQVEVSDLELQTLRKQIMKECKRGQDLTKEIVVLKGERDAFKTECDSLRSFQKRMEEAKVRNRSQLEGGDLHALVEEIREELDYEKDLNANLRLQLKKMQESNAELVLAVQDLDEMLEQKNSHMCNHSYANDRDKISAEKKINLSKCESDDDDEEQKALDELVKEHAEAKETHLLEKKIVDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHGLAYKLEQSELQDQLKMQYECSSSPSAMNDIEIHIKNLENQLKEQSEDFTNSLATIKALETHIRKLEEEMEKQTQRFEADLEEVTRDKVEQEQRAIQAEEAFRKIRLKNAKTAERLQEEFRKLSTQMTSTFDANEKATMKALTEASEVRAQKRVQEEELHKVKEELESTTAEYEVKLNQLSNQVDMMKGQIQQMLLEIEDKSKQLEKQKKHEEQVSRDFSNEIGLLKAEIGKLNMEISCLLEQVEDKEILKTDLEIMKKSVEEFETLLQKGTVERNELLATTELLKREAEESLNKLNRIIHHKDEKETEVRVLQSELEAVRAQYNDLKHYFSKEEVEKEKLLKQVFQLKAELKKKDDALISSEKRFRESTARAQLTDGTKNILKNKKTASVPQNSKEIATLKEKIKTLEGLIQTKETTLETSTTSFLQKEKELQTKIEELENRVEEFNRSVALQKVVQDRSFTTSNEISTELTSLKERNKSMESELKEMQERYLEMSLNFAEVEGERQKLVMAVRNLKSTQKG* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0293 1057 MobiDBLite consensus disorder prediction 143 168 - -
Vra11g0293 1057 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 146 IPR019448 -
Vra11g0293 1057 Coils Coil 498 532 - -
Vra11g0293 1057 Coils Coil 562 635 - -
Vra11g0293 1057 Coils Coil 394 438 - -
Vra11g0293 1057 MobiDBLite consensus disorder prediction 169 183 - -
Vra11g0293 1057 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1057 - -
Vra11g0293 1057 MobiDBLite consensus disorder prediction 143 183 - -
Vra11g0293 1057 MobiDBLite consensus disorder prediction 200 220 - -
Vra11g0293 1057 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1057 - -
Vra11g0293 1057 Coils Coil 957 991 - -
Vra11g0293 1057 MobiDBLite consensus disorder prediction 200 234 - -
Vra11g0293 1057 Coils Coil 308 335 - -
Vra11g0293 1057 Coils Coil 932 952 - -
Vra11g0293 1057 Coils Coil 872 892 - -
Vra11g0293 1057 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Vra11g0293 1057 Coils Coil 813 857 - -
Vra11g0293 1057 Coils Coil 999 1040 - -
Vra11g0293 1057 Coils Coil 679 749 - -
Vra11g0293 1057 Coils Coil 471 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0293 Vra-Chr11 2078794 2083928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0293 - - pvu:PHAVU_002G155900g 1739.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0293 11 2078794 2083928 Vra11g0293 11 2078794 2083928 ECH
Vra8g2244 8 40716783 40724503 Vra11g0293 11 2078794 2083928 ECH
Vra11g0293 11 2078794 2083928 Vra7g3485 7 54185260 54190683 PCT