Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra1g1870 ATGTTTAAGTCATGGAGCAAGAAAAACAAGACTAAAGCTGTATTCAAACTACAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGCCTGCACTGAAGGTAGCTTTGGTGCCAGATAATGTTGGGAAGCCTACGGTGAAACTGGAGAAAGTTGTTGTCCAGGATGGAACCTGTTCATGGGAGAATCCGATTTTTGAATCAGTAAAATTTGTTAGGGACGCAAAATCAGGAAAACTTCAAGAGAAAATCTACCATTTTGTTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTTGGAGAATCCTCCATTGACTTTGCTGATTTTGCTGCAGAAACTGAGCCACTGACTGTGTCCCTACCTCTGAAGTTTGCCAATTCAGGCGCAATCCTACATGTTGGTACCTTCTATTCCCTTCTCCACCTGGTTTCTTATGTCCCTCATATCATGCACATGATTTACTCATCTTTCAAAATCTCATATTCATCAAACCTTTTTTTTTTTTTCATTCTTGTTCCATATTATTTTTGTTGCAGGGTTTCATTCCTCTCCTTGTTATTTACCTGTTGCAGTACTTTCAGAGATGGGGAAGATTATGGAAATGGAAGCTCAAGACACCTACTGAGCATTTGCAGTGCAGATGAAAATTCTCGTAATGTTTATGAAGATTTCCCCAAGCTATTACCACCCTTTAGGCAAAATTCAATGCCGTGCAAAGGAACTATTGAGGCCATTGCAACAAGAGCTCAAATGCATAGGGGGTCACTGGGTTCAGCATCAGATAGGAGTTTAGGCGACTCCTGGAGAAACAGCCTGGAAGATACTCATCCTCAAGAAAGATTACAAGAGCCTTCAGATAATGTCGTTGAAAACCTCAGAAGTGAAATTGCTTCTCTGAAGAGGAAAGCCGAAGAATCAGAACTAGAGTTACAATCGCTTCAGAAGCTGATGGAGAAGGAATGCAGCCGAGGACAAAGTATGTCAAGGCAAATAATCAGCCTCAGAGACGAGAGAAATATGATCAAAACTAAATATGAGCAACTATTGTCGCAGCAAAATCTCATTAACGAGACCAAAAATTCAAAAGCCTTACAGACTGAGATTGAACAAGCGAGGCAGCAGTTAGAAGCAATAAAAGAAGAGCTTGCTTATGAAAAAGAGTTTAGTTATAATCTTAAATTGCAACTCCAGAAGACACAAAACTCAAACTCCGAACTACTTTTAGCAGTTAGAGAACTTGAAGCAATGCTGGAACATAAGAATAAGGAATTGTTGGACAATACTAAAGAGCATGATGATGCCACAGAATTAGGTCACTTGAAGCAGAAATTTGCAGAGCTGAATGGTGAAATAGACATTTGTTATAAGCAACGTGATGAGCTAAATGAGCAAATAAAAGAGCTCAACTTTGAGTGTGAGCATCTGAAGAAAGAAAACCTGGACACCTCTTTGAGATTAAACCATAAAGAAGCACAACAAATTGCGTTACAAAATAAATATTCAGCTTCTTTGGCAACTATAAAACAACTTGAATCTCAAGTACAGAGATTAGAAGAAAAGATAGGGAAGCAGGTGGATGATTTTTCAGGGTCTTTGATTTACATCAATGAACTTGAAAATCAAGTCAGTGATTTGAAGATAGAAATGAAAATGCAAGAAGAGGATTATCAAAAAGATTTCCAAGCCATGAAATGTGCAAAACTTGAACAGGAGGAACGGGCCATCCAAGCAGAGGAGACATTGATAAAGACTAGACACAACAATGATCTCGCATGTCAGCGTTTTCAGGATGAATATCGAAGTCTTTCAGCTGAAATGACATTGAAAGTAGAAGAAAACGAAAAGAAGGTCCTGGAAGCTTATGCAGAAGCTGATGAATTGCAGAAGCAGAACAAACTCATGGAAGAAATTCTCCAGAAATGTAATGAAGAGCTCAGGCTTGTTACAAATCAGAATGAATTGAAACTTCAACAGCTCTTGAACCAAATAGATTCAAAAGAAAAGAAAGTGGAAATGATGTCTCAAGAACTAGAGATCAAGTCCAAGCAACTTGAAGAAGTACAAAGGAAAAGGGATGAAAAGGATAAGGCATTAACAAAGCAAATTCAATTGCTCAGAATTGAAATTAGAAAACTGATGCTAGAAGAGCATGCATTATCTAAAGCTGATCCAACAGAGCTCATGACTAGGATGTTAATGCAAGAGAACAATGATGAGGAGATAAGGTTTGACAACCTAACGTCAGCATTAGAAATCTTTAAGACCCAGCACAATGAATTAAAACGTAACTTGCACGTGGAACAAACAGAGAAAGAAAATATGAAGGAAAAAATAACTCAGTTAGAAGGAGAGCTGAAGAAGAAGGTAGAAGAACTAAGTGCTGTAGAAAAGAGGCTCAAAAATAGCAAAGGAGCGACGGTCAAAAGTATGAATTTGGCTTCATGGAACTACGAGAGTGCTGCGTCTTGTTCATCCACTAAGGAACACGATAAGAAGTCAAGATCGGAAATGCAGATGGGAATGGATGATGCAAACACCCCTGTTAGAAAGTGTGAAAAAGGAAGAACCATATGCAATTCAGCGGAGAACGAAGTTCATCTAGCTTCACACAGAAGTGAAGTGAAAACTTGCTTGGAAAATAAGGCTATTGTCTTCAATTATGATGATGCTGGTGATTGTCCTACAAATGAGTTGTTGGATGAAGTGGCAGTACTAAAGGAAAGGAACAAATATATGGAAATTCAGCTGAAAGAAATGGAAGAAAGATATTCTGATATTAGTCTTAAGTTCGCAGAGGTGGAGGGAGAAAGACAACAGCTTGTTATGGCCCTACGGAATATGAGAAATGGTAAGAACTAG 2856 0.3852 MFKSWSKKNKTKAVFKLQFQATQVPKMKKPALKVALVPDNVGKPTVKLEKVVVQDGTCSWENPIFESVKFVRDAKSGKLQEKIYHFVVSTGSSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHVGTFYSLLHLVSYVPHIMHMIYSSFKISYSSNLFFFFILVPYYFCCRVSFLSLLFTCCSTFRDGEDYGNGSSRHLLSICSADENSRNVYEDFPKLLPPFRQNSMPCKGTIEAIATRAQMHRGSLGSASDRSLGDSWRNSLEDTHPQERLQEPSDNVVENLRSEIASLKRKAEESELELQSLQKLMEKECSRGQSMSRQIISLRDERNMIKTKYEQLLSQQNLINETKNSKALQTEIEQARQQLEAIKEELAYEKEFSYNLKLQLQKTQNSNSELLLAVRELEAMLEHKNKELLDNTKEHDDATELGHLKQKFAELNGEIDICYKQRDELNEQIKELNFECEHLKKENLDTSLRLNHKEAQQIALQNKYSASLATIKQLESQVQRLEEKIGKQVDDFSGSLIYINELENQVSDLKIEMKMQEEDYQKDFQAMKCAKLEQEERAIQAEETLIKTRHNNDLACQRFQDEYRSLSAEMTLKVEENEKKVLEAYAEADELQKQNKLMEEILQKCNEELRLVTNQNELKLQQLLNQIDSKEKKVEMMSQELEIKSKQLEEVQRKRDEKDKALTKQIQLLRIEIRKLMLEEHALSKADPTELMTRMLMQENNDEEIRFDNLTSALEIFKTQHNELKRNLHVEQTEKENMKEKITQLEGELKKKVEELSAVEKRLKNSKGATVKSMNLASWNYESAASCSSTKEHDKKSRSEMQMGMDDANTPVRKCEKGRTICNSAENEVHLASHRSEVKTCLENKAIVFNYDDAGDCPTNELLDEVAVLKERNKYMEIQLKEMEERYSDISLKFAEVEGERQQLVMALRNMRNGKN* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra1g1870 951 Coils Coil 609 696 - -
Vra1g1870 951 Coils Coil 499 526 - -
Vra1g1870 951 Coils Coil 353 387 - -
Vra1g1870 951 Coils Coil 288 322 - -
Vra1g1870 951 MobiDBLite consensus disorder prediction 266 282 - -
Vra1g1870 951 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Vra1g1870 951 MobiDBLite consensus disorder prediction 255 284 - -
Vra1g1870 951 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 196 950 - -
Vra1g1870 951 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 132 - -
Vra1g1870 951 Coils Coil 901 935 - -
Vra1g1870 951 MobiDBLite consensus disorder prediction 822 847 - -
Vra1g1870 951 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 136 IPR019448 -
Vra1g1870 951 PANTHER BNAC08G20130D PROTEIN 1 132 - -
Vra1g1870 951 PANTHER BNAC08G20130D PROTEIN 196 950 - -
Vra1g1870 951 Coils Coil 395 429 - -
Vra1g1870 951 Coils Coil 534 554 - -
Vra1g1870 951 MobiDBLite consensus disorder prediction 823 837 - -
Vra1g1870 951 Coils Coil 443 477 - -
Vra1g1870 951 Coils Coil 742 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra1g1870 Vra-Chr1 35671334 35676473 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra1g1870 - - vra:106765273 1828.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1870 1 35671334 35676473 Vra8g2244 8 40716783 40724503 PCT