Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1202 ATGGAAAAGGTTATCAGGTTGTCTGCAGAAAGGGGTGTGGTGGTTTTCACCAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTCCAAGAACTTCAAGTGGACCCTGTGGTCCATGAAATTGACAAAGACCCTGAAGGCAAGGAAATGGAGAAAGCTTTAACTAGGTTGGGTTGTTCAGCACCTGTTCCGGCGGTCTTCATCGGAGGCACGCTTGTCGGCTCCACCAATGAGGTCATGTCCCTCCATCTTAGTGGTTCACTCACTAAAATGCTCAAACCATATCGATCTTTATCTTAA 306 0.4673 MEKVIRLSAERGVVVFTKSSCCLCYAVNILFQELQVDPVVHEIDKDPEGKEMEKALTRLGCSAPVPAVFIGGTLVGSTNEVMSLHLSGSLTKMLKPYRSLS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1202 101 CDD GRX_GRXh_1_2_like 13 93 - -
Vra8g1202 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 98 IPR011905 -
Vra8g1202 101 SUPERFAMILY Thioredoxin-like 2 97 IPR036249 -
Vra8g1202 101 Pfam Glutaredoxin 13 75 IPR002109 -
Vra8g1202 101 Gene3D Glutaredoxin 1 100 - -
Vra8g1202 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
Vra8g1202 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Vra8g1202 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1202 Vra-Chr8 27322220 27322801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1202 1 95 Miscellaneous Gene Families AT4G15670 51.579 9.85e-34 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1202 K03676 - gmx:100527558 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1202 8 27322220 27322801 Vra8g1202 8 27322220 27322801 ECH
Vra3g0672 3 7218978 7219756 Vra8g1202 8 27322220 27322801 PCT
Vra8g1202 8 27322220 27322801 Vra3g0673 3 7221449 7222567 PCT