Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0672 ATGGACAAGGTGAAGAGGTTGACCTCTGAAAATGGTGTGGTGATTTTCACGAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTTCAAGAACTCAGGGCGAATCCTCTGGTTTATGAGATTGATCATGACCCTGAAGGCAGAGAAATAGAGAAAGCTTTGTTAAAGCTAGGGTGCAATGCTCCAGTCCCAGCTGTGTTCATCGCAGGGAAGCTAATTGGATCCACCAATGAAATCATGTCCCTCCACCTAAGAGGTTCACTCACTCCAATGCTGAAAGGCCAGCCTTTTTCTTGA 303 0.4587 MDKVKRLTSENGVVIFTKSSCCLCYAVNILFQELRANPLVYEIDHDPEGREIEKALLKLGCNAPVPAVFIAGKLIGSTNEIMSLHLRGSLTPMLKGQPFS* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0672 100 CDD GRX_GRXh_1_2_like 13 93 - -
Vra3g0672 100 Gene3D Glutaredoxin 1 98 - -
Vra3g0672 100 SUPERFAMILY Thioredoxin-like 1 96 IPR036249 -
Vra3g0672 100 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
Vra3g0672 100 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 95 IPR011905 -
Vra3g0672 100 Pfam Glutaredoxin 13 75 IPR002109 -
Vra3g0672 100 PANTHER MONOTHIOL GLUTAREDOXIN-S11 1 95 - -
Vra3g0672 100 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0672 Vra-Chr3 7218978 7219756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0672 1 95 Miscellaneous Gene Families AT4G15670 51.579 1.26e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0672 K03676 - gmx:100499748 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0672 3 7218978 7219756 Vra3g0672 3 7218978 7219756 ECH
Vra3g0672 3 7218978 7219756 Vra8g1202 8 27322220 27322801 PCT