Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0673 ATGGATAGAGTTAAGGACTTGGCATCAAAGAAGGCTGCTGTTATATTCACCAAGAGTTCATGCTGCATGTGTCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAGGGAAATGGAGTGGGCTTTGAGGGGTATGGGTTGCAATCCTTCAGTCCCAGCAGTGTTCATAGGTGGAAAATTTGTGGGGTCTTCCAAAGATATCATATCCCTCCATGTTGATGGCTCTCTCAAACAATTGCTCATGGATGCAAAGGCCATCTGGTTTTAG 309 0.4531 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALRGMGCNPSVPAVFIGGKFVGSSKDIISLHVDGSLKQLLMDAKAIWF* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0673 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Vra3g0673 102 Pfam Glutaredoxin 14 75 IPR002109 -
Vra3g0673 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Vra3g0673 102 Gene3D Glutaredoxin 1 100 - -
Vra3g0673 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Vra3g0673 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Vra3g0673 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Vra3g0673 102 CDD GRX_GRXh_1_2_like 12 93 - -
Vra3g0673 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Vra3g0673 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Vra3g0673 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0673 Vra-Chr3 7221449 7222567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0673 1 102 Miscellaneous Gene Families AT4G15700 48.039 1.37e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0673 K03676 - gmx:100788094 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0673 3 7221449 7222567 Vra3g0673 3 7221449 7222567 ECH
Vra3g0673 3 7221449 7222567 Vra8g1204 8 27349912 27350745 PCT
Vra8g1202 8 27322220 27322801 Vra3g0673 3 7221449 7222567 PCT