Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0856 ATGGGGCTGTATGAGCATTCAGATGTTATGCAGTGGGGTATTAATCTTTTTAGCTCTGACCCTGCATATAGTCCTGGATACTATTGTGACATAATTCAACCTAATACTGGTGATGTCTATAATAATGGGCACTACTTCCATAGCCACTATGCTACTCAACGTAACCAAATAGAGAATGACGAGATCATTGCACGAGCTCTTCAAGAACAATTTTCACGAGTAGACATTGATGATTGTTCAAGATATTCACAGACAAATGAAGAACAGTTCCATGCTTCTGAGCCAGCATATGATTGGCGTAACACATCGATGATGTATTGTTCTGGAGGTCATGATTATACCTACGATGGAATTGGGGACATAAAACCTTCTAGTTCATTATGTTGTAGGCCTTGTGAAGCAGAGGAAAGTTCATTGGAGCTAACTGACAATTATCCACTTGACGATGAAATAGGGAGGAAATTGAGTCAGATGGTTCCAATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCATACGGTGCAAGGTGATGGTAATTGTCAGTTCCGTGCATTATCTGATCAGTTGTTTAACACACCTGATCACCACAACAATGTGAGACAAGAAGTTGTGAACCAGCTAAGGTCTCATCCAGAGATTTATGAGGGATATGTTCCCATGGAATATGGCGAATATTTGGAGAAAATGTCTAAGAGTGGTGAATGGGGGGATCATGTCACTCTGCAAGCAGCCGCAGATTCGTATGGTGTTAGAATATTTGTGGTGACTTCATTCAAGGACACTTGTTGCATAGAGATTCTTCCTAATTTTGAGAATCCAAGAGGAGTGATTTTTCTTAGTTTTTGGGCTGAGGTGCATTACAACTCCATCAATCCTCAAGGAGATGCTTTCAAGAAAAGCAATCCTATTGACCCAGATATACCTTCAAGTGAATCAAAAAAGAAGAAAAGATGGTGGAACTTTGGGACCAAACATTAA 1050 0.3962 MGLYEHSDVMQWGINLFSSDPAYSPGYYCDIIQPNTGDVYNNGHYFHSHYATQRNQIENDEIIARALQEQFSRVDIDDCSRYSQTNEEQFHASEPAYDWRNTSMMYCSGGHDYTYDGIGDIKPSSSLCCRPCEAEESSLELTDNYPLDDEIGRKLSQMVPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHTVQGDGNCQFRALSDQLFNTPDHHNNVRQEVVNQLRSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVTLQAAADSYGVRIFVVTSFKDTCCIEILPNFENPRGVIFLSFWAEVHYNSINPQGDAFKKSNPIDPDIPSSESKKKKRWWNFGTKH* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0856 349 Gene3D - 174 322 - -
Vra8g0856 349 PANTHER OTU DOMAIN CONTAINING PROTEIN 32 345 - -
Vra8g0856 349 ProSiteProfiles OTU domain profile. 193 317 IPR003323 -
Vra8g0856 349 MobiDBLite consensus disorder prediction 322 349 - -
Vra8g0856 349 Coils Coil 50 70 - -
Vra8g0856 349 SUPERFAMILY Cysteine proteinases 179 317 IPR038765 -
Vra8g0856 349 Pfam OTU-like cysteine protease 199 285 IPR003323 -
Vra8g0856 349 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 32 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0856 Vra-Chr8 18157040 18162437 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0856 - - gmx:100811851 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0856 8 18157040 18162437 Vra8g1986 8 37585369 37592854 ECH
Vra8g0856 8 18157040 18162437 Vra8g0856 8 18157040 18162437 ECH
Vra3g0424 3 4936433 4941689 Vra8g0856 8 18157040 18162437 PCT