Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1986 ATGGCGACACATGACATGGATCCTGATGTTGTTCGCTGGGGTCTTCACCTTCTAGATGTTTGCACGCTTTCCCATCATGGTTCGCCTAGTATTCTTACCCAGTATGATCCTGATTTTAGTCGAGTTGAATATGTCAGAGAAGGATTCTGTCAGCATGAGTATGTGGAGAATGACGAGGCTGTTGCACGAGCTTATCAAGAAGAATTATCACAACTTGACTCCATGGGAGCTTCTGGGACACCCAGTTATCAGAATGAGGGAATGCAAGGATCTGTCTATACACAAGATTGGCCTCATTCTTCAAATGGAAACTATAATTACGGAAACGAGTCTTGTCAGAACTCTGTAGATGAGTCATCGTACAATATGAAAGATGTGGAGAATTATGGTCCAAGTGAAACGGGAAATGATATGCATGACATTCATGTTTTTGGTTCCTCTGGGTCAGGAGAGGTACCTGTTACTAGAGATGATGTCTGGAATTCATTGGAAATATCAGACGAATCTTCTCTTGATGGCGAAGTTGGCAAAAGATTATACCAGATGGTTCCCATCCCCCATATTCCTAAAACCAATGAAAAAATACCATCTGATGATGAAGAGACATCAGATCATCAAAGGCTTCTAGACAGATTGCAGTTATATGATCTGATTGAGAATAAGGTTCAAGGAGATGGTAACTGCCAGTTCCGTTCTTTGTCAGACCAGCTCTATCGATCTCCAGACCATCACCAATTTGTGCGGGAGCAGATTATTCAACAGCTCAAATCTTCCCCAGATCTGTATGCTGGATATGTTCCCATGGGTTATAGTGATTATTTGAAGAAGATGAGCAAGAGCGGTGAATGGGGTGATCATGTCACATTGCAGGCGGCTGCAGATTGGTACGGTGTCAAAATTCTTGTTATTACATCTTTTAAGGACACGTGTTACATAGAGATTCTTCCACAGATACAGAAGTCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACTCAATCTATCCAGAAGGAGAATTGCCCTTGTTTCAGACAAGGAAAAAGAAGAAATGGTGGAATTTTGGTGCTTAG 1083 0.4192 MATHDMDPDVVRWGLHLLDVCTLSHHGSPSILTQYDPDFSRVEYVREGFCQHEYVENDEAVARAYQEELSQLDSMGASGTPSYQNEGMQGSVYTQDWPHSSNGNYNYGNESCQNSVDESSYNMKDVENYGPSETGNDMHDIHVFGSSGSGEVPVTRDDVWNSLEISDESSLDGEVGKRLYQMVPIPHIPKTNEKIPSDDEETSDHQRLLDRLQLYDLIENKVQGDGNCQFRSLSDQLYRSPDHHQFVREQIIQQLKSSPDLYAGYVPMGYSDYLKKMSKSGEWGDHVTLQAAADWYGVKILVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNSIYPEGELPLFQTRKKKKWWNFGA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1986 360 ProSiteProfiles OTU domain profile. 217 341 IPR003323 -
Vra8g1986 360 PANTHER OTU DOMAIN CONTAINING PROTEIN 22 358 - -
Vra8g1986 360 SUPERFAMILY Cysteine proteinases 201 340 IPR038765 -
Vra8g1986 360 Pfam OTU-like cysteine protease 223 309 IPR003323 -
Vra8g1986 360 Gene3D - 197 344 - -
Vra8g1986 360 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 22 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1986 Vra-Chr8 37585369 37592854 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1986 - - gmx:100820379 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0856 8 18157040 18162437 Vra8g1986 8 37585369 37592854 ECH
Vra8g1986 8 37585369 37592854 Vra8g1986 8 37585369 37592854 ECH