Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0424 ATGGTTTTGTATGAGCATTCGGATGTTTTTCAGTGGGGTCTTAATCTTCTTGATGGTGACCCTGCTTATAGTCCTGGATACTATGGCAACATAATTCAACATGATACTGGAGACATCTATAATGGACACTACTTCCATAGCCATTATGATAATGAATGCAACCATGTAGAGAATGATGAGATCATTGCCCGTACACTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATCTTCCGGATATTTTCAGCAAGGTGAACAACAGTTCCATGTTCCTGAGACTCAGCCTTCATATGATTGGCATAACTCTTCAATGATGAACTACTGCTCAGGAGATCATGATTATGCTCAAGAAGGAGTTGGTGATGGAGAACCCTCTAGTTCATGTTCTAGTCCTTGTGAAACAGAGGAATATTCATTGGAGCTAACTGACAATTATCCACTTGATGATGAAGTTGGGAGGAGATTGAGTCAAATGATACCAATTCCCCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGACGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCTGTTATATGACTTTGTGGAGAACAAAGTACATGGCGATGGTAATTGTCAGTTCCGAGCACTGTCTGATCAATTGTATCACGCACCTGATCACCACAAGTTTGTGAGACGACAAGTTGTTGATCAGCTTAAATCTAATCCAGAGATTTATGATGGATATGTTCCCATGGAGTACGATGATTATTTGGACAAGATGTCTAAGAGTGGCGAATGGGGTGATCATGTTACTCTCCAAGCAGCTGCAGATTCGTATGGTGTGAGAATTTTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAACCCAAAAGGAGTGATTTTCCTGAGTTTCTGGGCAGAGGTGCACTACAACTCCATTTATCCCCAAGGAGATATACCATCAAATGAATCTAGAAAGAAGAAAAGGTGGTGGAGCTTTGGCAGCAAGCATTAG 1020 0.4049 MVLYEHSDVFQWGLNLLDGDPAYSPGYYGNIIQHDTGDIYNGHYFHSHYDNECNHVENDEIIARTLQEEFSQLEIAESSGYFQQGEQQFHVPETQPSYDWHNSSMMNYCSGDHDYAQEGVGDGEPSSSCSSPCETEEYSLELTDNYPLDDEVGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLLLYDFVENKVHGDGNCQFRALSDQLYHAPDHHKFVRRQVVDQLKSNPEIYDGYVPMEYDDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFENPKGVIFLSFWAEVHYNSIYPQGDIPSNESRKKKRWWSFGSKH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0424 339 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 25 335 - -
Vra3g0424 339 PANTHER OTU DOMAIN CONTAINING PROTEIN 25 335 - -
Vra3g0424 339 ProSiteProfiles OTU domain profile. 194 318 IPR003323 -
Vra3g0424 339 SUPERFAMILY Cysteine proteinases 180 318 IPR038765 -
Vra3g0424 339 Gene3D - 176 322 - -
Vra3g0424 339 Pfam OTU-like cysteine protease 201 286 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0424 Vra-Chr3 4936433 4941689 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0424 - - aip:107648617 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0424 3 4936433 4941689 Vra8g0856 8 18157040 18162437 PCT