Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0634 ATGGAGGCTTTATGCAACAGGGATGAAAATTTTCAGAAGAAAAAAGACGGGCTTCCTTCTTCTGCCACTGATTCAACTCAAGAACTCAAAGGATGTGCTTCTCCTCCTCTTGGTTGGCCTATTCGGAAGGCTACATTCTCCAAATGCCGCAAATCAGATGAGAAAGAAAATGAACCTGTTACTCACTTGGAAGATACGAAATTTACCAGCATCAGTTCAAAAATGGCTGGAATCGATGCAATGAAGGAAAGGTTTGCAAAATTACTGCTTGGGGAAGATATGTCAGGATCTGGGAAAGGAGTCTGCAGTGCTTTGGCTATCTCAAATGCCATTACAAATCTGTGTGCCACTGTATTTGGGCAATTATGGAGACTAGAACCTGTTCCATGTGAAAAGAAAGAAATGTGGCGGAGGGAGATGGAATGGCTTGTAAGTGTTAGTGATCATATTGTTGAGTTAATACCTTCTTGGCAGACATTTCCGGATGGAAGTAAGCTAGAGGTAATGACTTGCAGACCAAGGTCAGATCTTTTTATGAATCTTCCAGCTCTGCGCAAACTCGACAACATGCTTCTTGAAATTTTAGATGGTTGCAAAGATATGGAATTTTGGTATGTTGACCAAGGAATTGTAGCCCAAGATGCAGAGGGTTCAGCTTCATTTTGCAAAAGAATTCAGAGACAAGAGGATAAGTGGTGGCTCCCTGTACCTCGTGTGCCTCCTGCTGGCCTCAGTGAGAACTCGAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGCCAAATTCTAAAAGCTGCCATGGCTATCAACAATGGTGCTTTAGCTGAAATGGAAGTTCCTGAGTCATACTTGGAAACTCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCATTACATTACATCAGAGAAATTCTCTCCAGAGTGTCTGCTGGATTGCCTAGACCTCTCCTCGGAGCATGTGGCACTAGAGATTGCAAACCGTGTTGAAGCCTCAATATATGTGTGGCGTAGAAGAGCTCACTCTAAACCCCCACCTAATCCTAACCGTTCAACTACAAAGTCATCGTGGGAAATTGTGAAGGACTTCATGGCTGATGGAGACAAGAGAGAACTACTAGCAGAAAGAGCTGAAAATGTTCTACTTTCATTGAAGCAGAAGTATCCTGGTCTAACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCATACTTGAGAGCTATTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGCATAGACGATTTGCTATATGTGGATGACTTGACTAAACATTCAGATAGGTTTCCATTGGTTCCAATGACAGTGTCTGTCTCAGGCACTCCTCACAAAGCAGTTGGCACACCAAGCTTTTCACCTGCTCCATCACTCATTAGTCCTGCAAGGGGAGAGAGATCTCCTTTCCTCAACAACAACATTAACAATAACAACAACAATATTAAACCTCAACGTCGTGGCTTTGGGGTGAGAAGAGTATTGTCGAATTATCTTGGTGCAGAATCAAAAGAAACAAAGAATTTTAGCAGTTCAACTGTTGTGGTGAATGGTTCTAACCCAAGCTGCAATAAAACAGAACAGGCAGAACATCACAAGAAGCCACATGCCATGAATGGCAAGACAAAATGA 1686 0.4247 MEALCNRDENFQKKKDGLPSSATDSTQELKGCASPPLGWPIRKATFSKCRKSDEKENEPVTHLEDTKFTSISSKMAGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFGQLWRLEPVPCEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMLLEILDGCKDMEFWYVDQGIVAQDAEGSASFCKRIQRQEDKWWLPVPRVPPAGLSENSRKQLNHTRECASQILKAAMAINNGALAEMEVPESYLETLPKNGRTCLGDFVYHYITSEKFSPECLLDCLDLSSEHVALEIANRVEASIYVWRRRAHSKPPPNPNRSTTKSSWEIVKDFMADGDKRELLAERAENVLLSLKQKYPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPMTVSVSGTPHKAVGTPSFSPAPSLISPARGERSPFLNNNINNNNNNIKPQRRGFGVRRVLSNYLGAESKETKNFSSSTVVVNGSNPSCNKTEQAEHHKKPHAMNGKTK* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0634 561 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 78 444 IPR005512 GO:0005085
Vra6g0634 561 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 20 531 - -
Vra6g0634 561 ProSiteProfiles PRONE domain profile. 68 450 IPR005512 GO:0005085
Vra6g0634 561 MobiDBLite consensus disorder prediction 524 561 - -
Vra6g0634 561 MobiDBLite consensus disorder prediction 1 36 - -
Vra6g0634 561 MobiDBLite consensus disorder prediction 1 15 - -
Vra6g0634 561 Gene3D PRONE domain, subdomain 1 70 307 - -
Vra6g0634 561 Gene3D PRONE domain, subdomain 1 308 449 - -
Vra6g0634 561 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 531 IPR038937 GO:0005085
Vra6g0634 561 MobiDBLite consensus disorder prediction 524 543 - -
Vra6g0634 561 MobiDBLite consensus disorder prediction 16 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0634 Vra-Chr6 5836869 5840231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0634 - - vun:114193182 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0634 6 5836869 5840231 Vra9g0996 9 12225533 12228930 ECH
Vra6g0634 6 5836869 5840231 Vra6g0634 6 5836869 5840231 ECH
Vra3g1005 3 10099107 10102680 Vra6g0634 6 5836869 5840231 PCT