Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0282 ATGGTCCTTGGAACAATGGCAAGACATTTGGACACAATAATAGGGCCTGGTGTTATGCTTCTTTATCCTCTATATGCATCAATGAAGGCGATTGAAAGTCCTTCAACCTTAGATGATCAACAATGGCTAACGTATTGGGTTTTATACTCCTTCTTGACCCTCTTTGAGCTTTCCACTCATAAGATCCTATGTTGGTTTCCAATTTGGGGATACCTGAAGCTTGTGTTTTGCATCTGGTTGGTGCTGCCAATGTTCAATGGAGCGGCTTACATATATGAAAAATATGTGAGGCAATACATAAAGAATATTGGAAGCTACAGAAGTTCCAATTATCCTGAGGAGTACAAGAAGGTCCTTCACATGATGACCTTCGATGCAAGGAAAGCAGTTGAACGCTATATCGATAGACATGGCCCTGAAGCTTTTGAGAGAGTAATCAGAGCGGCTGAAAAAGAAGCGAAGAAGCGCTGA 471 0.4161 MVLGTMARHLDTIIGPGVMLLYPLYASMKAIESPSTLDDQQWLTYWVLYSFLTLFELSTHKILCWFPIWGYLKLVFCIWLVLPMFNGAAYIYEKYVRQYIKNIGSYRSSNYPEEYKKVLHMMTFDARKAVERYIDRHGPEAFERVIRAAEKEAKKR* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0282 156 PANTHER HVA22-LIKE PROTEIN 2 156 - -
Vra6g0282 156 Pfam TB2/DP1, HVA22 family 23 99 IPR004345 -
Vra6g0282 156 PANTHER HVA22-LIKE PROTEINS 2 156 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0282 Vra-Chr6 2093917 2095776 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0282 K17279 - gmx:100779435 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0220 10 6212307 6213927 Vra6g0282 6 2093917 2095776 PCT
Vra5g0883 5 14844808 14846214 Vra6g0282 6 2093917 2095776 PCT