Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0883 ATGACCGAAGGAAGCGAAGGAGAGAAAAACAGAACCATGAAACGGATTCTTCTCATAATAAACTGTCTCTTACTCGCCGTCGGAACCGCCGGCGGCCCCCTCGTTATGCGTCTCTACTTCCTCCGTGGCGGCAACCGTGTCTGGCTTTCCAGCTTCCTCGAAACAGCCGGCTTCCCCTTCATGCTACTCCCCCTCGCCGTCTCTTACTTCCGCCGCCGCGCAGCGGCTGCAACGGCAGGAACCGCTAAACCCAGTCCGGTCTCGATGAAACCCCCTCTCCTCGCGGCCTCCGTCTTCATCGGAGTCCTCACCGGCCTCGACGACTACCTCTACGCCTACGGCGTGGCGCGCCTCCCCGTGTCCACGTCATCACTCATCATCGCCACACAACTCGGCTTCACCGCGCTGTTCGCGTTCTTACTGGTGCGCCAGAAGTTCACCTCGTACTCCGTGAACGCAGTAGTTTTGCTTACCGTCGGCGCCGGCGTTCTGGCGCTCCACAGCAGCGGAGACCGCCCCCCCGGCGAGTCCGTGAAGGCCTACGTGATGGGGTTCGTGATGACAGTAATCGCTGCAGCATTGTACGGCTTCGTGTTACCCATGGTGGAGTTGGTGTACAAAAAAACCAAACAACCTATTACCTATTCCCTTGTCATGGAGATTCAGTTCGTGATGTGCTTCTCCGCCACTCTCTTCTGCCTCATCGGCATGATCATTAACAACGACTTTAAGGTGATTCCCAGAGAAGCTAAAACATTCAAGCACGGGGAAGTTAATTACTACGTTGTGTTGGTGGGAAGTGCAATAATATGGCAAGCTTTTTTCTTGGGAGCTATTGGGGTTATTTTTTGTGCGTCGTCTTTGTTTTCTGGTATTTTAATTGCAGTTTTGCTACCCGTAACGGAAGTGTTGGCGGTTATTTTCTACAAAGAGAAGTTTCAAGCTGAGAAGGGTGTTTCTCTGTTGCTGTCGCTCTGGGGCATGGTGTCTTACTTCTATGGGGAGATTAAACATGAGAAGAAGATGAAGAAAAAGAACAACAGTGACATGGAAGCAACAGAGATGTCTGAATCGGGAATGATTGAAAAATGA 1092 0.5201 MTEGSEGEKNRTMKRILLIINCLLLAVGTAGGPLVMRLYFLRGGNRVWLSSFLETAGFPFMLLPLAVSYFRRRAAAATAGTAKPSPVSMKPPLLAASVFIGVLTGLDDYLYAYGVARLPVSTSSLIIATQLGFTALFAFLLVRQKFTSYSVNAVVLLTVGAGVLALHSSGDRPPGESVKAYVMGFVMTVIAAALYGFVLPMVELVYKKTKQPITYSLVMEIQFVMCFSATLFCLIGMIINNDFKVIPREAKTFKHGEVNYYVVLVGSAIIWQAFFLGAIGVIFCASSLFSGILIAVLLPVTEVLAVIFYKEKFQAEKGVSLLLSLWGMVSYFYGEIKHEKKMKKKNNSDMEATEMSESGMIEK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0883 363 MobiDBLite consensus disorder prediction 344 363 - -
Vra5g0883 363 Pfam Purine nucleobase transmembrane transport 16 341 - -
Vra5g0883 363 PANTHER OS09G0467300 PROTEIN-RELATED 8 350 IPR030182 GO:0015211|GO:0016021
Vra5g0883 363 PANTHER PURINE PERMEASE 2 8 350 - -
Vra5g0883 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 85 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0883 Vra-Chr5 14844808 14846214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0883 28 345 Organic Solute Cotransporters AT1G28230 65.015 2.09e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0883 - - gmx:100803818 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0883 5 14844808 14846214 Vra5g0883 5 14844808 14846214 ECH
Vra6g1290 6 24550730 24552489 Vra5g0883 5 14844808 14846214 PCT
Vra5g0883 5 14844808 14846214 Vra6g0282 6 2093917 2095776 PCT