Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0220 ATGTATCTAATTCTACACTGCAAAGATTTCATCCACACTTCAAATCTGCTCCCAACAAAAGATCTTAATAACAGCTTCTTCATCATGGGCATTCTTGGAACAATGGCAAGACATTTGGACACAATAGTGGGGCCTGGAGTGTTGCTCCTATATCCTTTATACGCATCAATGAGGGCAATTGAGAGTCCTTCAACCTTGGATGATCAACAGTGGCTAACATATTGGATTTTATACTCCTTCATCACCCTCTTTGAGCTTTCTTGCTACAAGATCCTAGCATGGTTTCCAATTTGGCCATACATGAAGCTAGTTTTTTGCCTCTGGCTGGTATTGCCAATGTTCAATGGAGCTGCTTACATATATGAGAACTATGTGAGGCAATATGTCAAGAACATAGGAAGCTTCTATGGAAATTCCAAGTATCATGAGGACCAAAAGAAAGTTCTTCAGATGATGAGTTTTGATGCAAGGAAAGCTGTTGAACGTTATATAGATACATATGGTTCTGAAGCCTTTGAGAGAGTAGTCAAAGCAGCTGATAGAGAAGCAAGGAGACACTGA 561 0.3993 MYLILHCKDFIHTSNLLPTKDLNNSFFIMGILGTMARHLDTIVGPGVLLLYPLYASMRAIESPSTLDDQQWLTYWILYSFITLFELSCYKILAWFPIWPYMKLVFCLWLVLPMFNGAAYIYENYVRQYVKNIGSFYGNSKYHEDQKKVLQMMSFDARKAVERYIDTYGSEAFERVVKAADREARRH* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0220 186 Pfam TB2/DP1, HVA22 family 52 128 IPR004345 -
Vra10g0220 186 PANTHER HVA22-LIKE PROTEINS 31 185 IPR004345 -
Vra10g0220 186 PANTHER HVA22-LIKE PROTEIN 31 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0220 Vra-Chr10 6212307 6213927 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0220 K17279 - gmx:100819566 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0220 10 6212307 6213927 Vra6g0282 6 2093917 2095776 PCT