Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1290 ATGAACTCCACTTGTCTTACATACTGGTCAAGCTATCACTGTCTGAAAACATCCATTATTGTCACACAAACATCATACCAAAAACAAAGAAAGAAACTTATGTATGTTAGTAAGAGAGGAAGAAGAAGAGAAAAGAAAGCGAGAAAAAGAAGCATGAAGAGAGTGCTCCTACTACTAAACTCGGTTCTTCTAGCGCTAGGCACTTCCGGTGGCCCCCTCGTAATGCGTCTCTACTTCATCCACGGCGGCAACCGAATCTGGCTCTCCAGCTTCCTCGAAACCGCCGCTTTCCCTCTCATTCTCATTCCCTTAACAATCTCTCACCTTCATCCCAATTTTCATCATTCACCAAAACCTAACCTCGTCTCTATCAAACTCCCTCTCTTTATCGCCTCCGCCGTTATCGGAATCCTCACCGGCCTCGACGACTACCTCTACGCCTGCGGCATAGCGCGCCTTCCCGTCTCCACTTCCTCCCTTATCCAAGCCTCGCACCTCGCCTTCACCGCCGTCTTTGCCTTCCTCCTCGTTAGGCACAGGTTCACGGTGTACTCCGTCAACGCCATCGTGCTTCTCACCATCGCAGCGGTGGTGCTGGCGCTGCGTTCCGGTGGAGACCGTCCGCCAGGCGAGTCCACGCGGCAGTACGTGATCGGTTTCGTTATGATTCTGGCGGCTGCGGCGCTGTACGGATTGGTCCTGCCGTTGATGGAGTTGGTGTACAAACGGAGCAAGCAGCGCGTTACGTACTCTCTTGTGATGGAGATTCAGCTTGTGATGTGCTTCTTTGCTACCTTGTTCTGCACCCTTGGCATGCTCATCAATAATGACTTCAAGGTGATTTCGCGAGAAGCAAAAGACTATGAACTTGGCGAAACCAAGTACTATGTTGTGCTAGTGGGGAGTGCAATAATGTGGCAGTTCTTCTTCTTGGGAGCAATAGGGGTTATCTTTTGCTCCTCGTCTTTGTTTTCAGGAATTATAATTGCTGCTTTTCTTCCAGTGACTGAAGTTTTGGGTGTTATCGTATACAAAGAAAATTTTGAGGCAGAGAAAGGGGTTGCTTTGGTGCTGTCTCTTTGGGGGTTTGTGTCATATTTCTATGGTGAAATGAAACAAGAAAGGGAAAAGAACAAGAATGGTTGCCCAGAAACAGAGCTACCTCAAAGTCTTTCTCCCAATGCATGA 1188 0.4848 MNSTCLTYWSSYHCLKTSIIVTQTSYQKQRKKLMYVSKRGRRREKKARKRSMKRVLLLLNSVLLALGTSGGPLVMRLYFIHGGNRIWLSSFLETAAFPLILIPLTISHLHPNFHHSPKPNLVSIKLPLFIASAVIGILTGLDDYLYACGIARLPVSTSSLIQASHLAFTAVFAFLLVRHRFTVYSVNAIVLLTIAAVVLALRSGGDRPPGESTRQYVIGFVMILAAAALYGLVLPLMELVYKRSKQRVTYSLVMEIQLVMCFFATLFCTLGMLINNDFKVISREAKDYELGETKYYVVLVGSAIMWQFFFLGAIGVIFCSSSLFSGIIIAAFLPVTEVLGVIVYKENFEAEKGVALVLSLWGFVSYFYGEMKQEREKNKNGCPETELPQSLSPNA* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1290 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 125 204 - -
Vra6g1290 395 PANTHER PURINE PERMEASE 42 392 - -
Vra6g1290 395 PANTHER OS09G0467300 PROTEIN-RELATED 42 392 IPR030182 GO:0015211|GO:0016021
Vra6g1290 395 Pfam Purine nucleobase transmembrane transport 56 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1290 Vra-Chr6 24550730 24552489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1290 52 388 Organic Solute Cotransporters AT1G28230 55.043 2.23e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1290 - - vra:106764151 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1290 6 24550730 24552489 Vra6g1290 6 24550730 24552489 ECH
Vra6g1290 6 24550730 24552489 Vra5g0883 5 14844808 14846214 PCT