Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0719 ATGAAGACTAGGTGTTCGATGATATTTCTTTGCATACTGGCTTACGCGTATGTTTCCGTTTCAGAGAAATTATCAGCGTATGACGTTCTTGAGAAATATGGCCTTCCGGTGGGTCTTCTTCCCAAAGGTGTGACAGAATACGAGCTAAACGAAAAAAATGGCCACTTCACTGCATATCTGGATCAAACATGCTATTTCAGCGTACAATCCTATGACCTAAAGTACAAGTCCACCATCAAGGGCGTGATCTCGAAGGGGAAGTTGTCCAAGCTGAAGGGTGTTAGCGTGAAAGTTGAGGTGTTGTGGATCCCAATCACTGAGGTCACTCGCGACGGTGATGACCTCAAATTCTCTGCCGGCGTTGCATCCGCCGGTTTTAGCGCCGACAGCTTTTCGGAGAGCCCTCAGTGTGGATGTGGATTCGATTGTGAGAATTTCAACCAAAACGGTGACGTTTCTTCTTCTCTATAG 471 0.465 MKTRCSMIFLCILAYAYVSVSEKLSAYDVLEKYGLPVGLLPKGVTEYELNEKNGHFTAYLDQTCYFSVQSYDLKYKSTIKGVISKGKLSKLKGVSVKVEVLWIPITEVTRDGDDLKFSAGVASAGFSADSFSESPQCGCGFDCENFNQNGDVSSSL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0719 156 Pfam Protein of unknown function, DUF538 26 131 IPR007493 -
Vra3g0719 156 PANTHER DUF538 FAMILY PROTEIN 7 151 - -
Vra3g0719 156 SUPERFAMILY At5g01610-like 8 143 IPR036758 -
Vra3g0719 156 Gene3D - 14 137 IPR036758 -
Vra3g0719 156 PANTHER T31J12.3 PROTEIN-RELATED 7 151 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0719 Vra-Chr3 7546297 7547137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0719 - - gmx:100500136 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0719 3 7546297 7547137 Vra3g0719 3 7546297 7547137 ECH
Vra8g1244 8 28141412 28142150 Vra3g0719 3 7546297 7547137 ECH
Vra3g0719 3 7546297 7547137 Vra8g1245 8 28159456 28160299 PCT