Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1245 ATGCTCTATTACAGTGAGAGTAAACGCCTCAGGATGATGTCTTCTTCAATGAAATTCCTATGCATCGTGGTATTGTGTTTGACGGCATCATGCGCGTTAAGTCAACCGCAGAGGTTATCGGTGTACGATGTTCTTATGGAGTACGGATTCCCGGTGGGGCTTCTTCCGAAGGGAGCGATAGGGTATTCGCTGAACAGAGAAACGGGGCAGTTCGCTGTGTATTTTAACGGAGCTTGCAGCTTCGTCATAGAGTCTTACACCCTCAACTACAAGTCCACCATCACAGGACTGATCTCCAACGGTAGGCTCTACAATCTCAAGGGTGTGACCGTAAAGATCTTGCTCCTCTGGCTCAACATCGTCGAGGTCAGGCGTCAAGGTGAAGATATCTTCTTCTCTGTCGGCATCGCTTCCGCCGACTTTGGCGTCGAGAATTTCCTCGAGAGCCCCCAGTGCGGCTGTGGCTTCGATTGCAACAAACTTCCCCTAAACGGTGACGTTTCTTCAATTTAG 513 0.4971 MLYYSESKRLRMMSSSMKFLCIVVLCLTASCALSQPQRLSVYDVLMEYGFPVGLLPKGAIGYSLNRETGQFAVYFNGACSFVIESYTLNYKSTITGLISNGRLYNLKGVTVKILLLWLNIVEVRRQGEDIFFSVGIASADFGVENFLESPQCGCGFDCNKLPLNGDVSSI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1245 170 Pfam Protein of unknown function, DUF538 41 146 IPR007493 -
Vra8g1245 170 PANTHER DUF538 FAMILY PROTEIN 21 162 - -
Vra8g1245 170 PANTHER T31J12.3 PROTEIN-RELATED 21 162 IPR007493 -
Vra8g1245 170 SUPERFAMILY At5g01610-like 16 158 IPR036758 -
Vra8g1245 170 Gene3D - 29 149 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1245 Vra-Chr8 28159456 28160299 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1245 - - gmx:100500410 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0719 3 7546297 7547137 Vra8g1245 8 28159456 28160299 PCT