Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1204 ATGGATAGAGTAAGAGAGTTGGCGTCAAAGAAGGCAGCAGTTATATTCACCAAGAGTTCGTGTTACATGTGCCACAGCATCACGCAACTCTTCTATGAGCTCGGAGCAAGCCCTGCAGTGCATGAGCTTGACAAGGATGCTTATGGGAGGGAAATGGAGTGGGCTTTGAGGAGCATGGGATGTAACCCTTCAGTGCCTGCAGTTTTCATTGGTGGCAAATTTGTAGGGTCATCCAAGGATGTCATATCCCTCCATGTTGATGGTTCCCTCAAACAAATGCTTATGGCTGCCAAGGCCATATGGTTTTAG 309 0.4757 MDRVRELASKKAAVIFTKSSCYMCHSITQLFYELGASPAVHELDKDAYGREMEWALRSMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQMLMAAKAIWF* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1204 102 Gene3D Glutaredoxin 1 101 - -
Vra8g1204 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Vra8g1204 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Vra8g1204 102 Pfam Glutaredoxin 14 75 IPR002109 -
Vra8g1204 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Vra8g1204 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Vra8g1204 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Vra8g1204 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Vra8g1204 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Vra8g1204 102 CDD GRX_GRXh_1_2_like 12 93 - -
Vra8g1204 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1204 Vra-Chr8 27349912 27350745 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1204 1 102 Miscellaneous Gene Families AT4G15700 47.059 3.74e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1204 K03676 - gmx:100305876 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0673 3 7221449 7222567 Vra8g1204 8 27349912 27350745 PCT
Vra8g1204 8 27349912 27350745 Vra3g0675 3 7233809 7234438 PCT