Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0449 ATGAAGCGAATTTCGATTGCAATTTCACTAATATCCATCTTATTTTGTTCCGCAATATTAACTAGAGCTCTTCCTGAGGATGAACCTGAGTTTGGTTACGATGAAGATAGTGCAAATGGGCCTCAGTACTGGGGTGATATTAAAGAAGCATGGGAAACCTGCAAAACAGGGCAAATACAATCTCCTATTGATTTGTCCACAAACGTTGTGCAAGTGATTCCCAAGTCAGGGAGTCTCAAGTATTGGACCTATAACCCTCAATATGCTACTCTCTCCAACAGAGGTCATGATGTTGCAGTAAATTTGAGAGGGGATGCAGGCTCAATAGACATAGATGGATCATCTTTTTTCCTCCAACAAATCCATTGGCACTGGCCCTCCGAACATACCATCGACGGCAGGAGGTATGACTTGGAGTTGCACATGGTGCATGTTAGTCCACAGGCTGATGGAACAAACAAGACTGCTGTTGTTGGTGTTTTGTACGAGTACGGTTCTCCTGATCCATTGCTCTCTAGGGTGGAACAATACCTAGTTGACATTCCTAAAGAAAACGAAGAGGAAAGTGTTGGAGAAATTGATCCCTCAGAGATCATGAGTGGTAAGATGTTCTACAGGTACATAGGATCACTCACTGCACCTCCTTGCACCGAAGGCATCATTTGGACCATTGATAAGGAGATAAGAACTGTTTCAATAGGACAAGTGGAGTTACTGAAGAATACTGTACTTATACCTTATGCTCCAAGGAATGCAAGGCCACTGCAGCCTCTAAATCAGAGGAACTTACGGCTCTACGTTTCAAAGAATAAGCCTCTTTATTAG 825 0.4291 MKRISIAISLISILFCSAILTRALPEDEPEFGYDEDSANGPQYWGDIKEAWETCKTGQIQSPIDLSTNVVQVIPKSGSLKYWTYNPQYATLSNRGHDVAVNLRGDAGSIDIDGSSFFLQQIHWHWPSEHTIDGRRYDLELHMVHVSPQADGTNKTAVVGVLYEYGSPDPLLSRVEQYLVDIPKENEEESVGEIDPSEIMSGKMFYRYIGSLTAPPCTEGIIWTIDKEIRTVSIGQVELLKNTVLIPYAPRNARPLQPLNQRNLRLYVSKNKPLY* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0449 274 CDD alpha_CA_prokaryotic_like 40 261 IPR041891 -
Vra3g0449 274 PANTHER CARBONIC ANHYDRASE 3 272 IPR023561 GO:0004089|GO:0008270
Vra3g0449 274 SMART Carb_anhydrase_2a 33 267 IPR001148 -
Vra3g0449 274 SUPERFAMILY Carbonic anhydrase 30 263 IPR036398 -
Vra3g0449 274 Gene3D Alpha carbonic anhydrase 28 272 IPR036398 -
Vra3g0449 274 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 3 272 - -
Vra3g0449 274 Pfam Eukaryotic-type carbonic anhydrase 40 264 IPR001148 -
Vra3g0449 274 ProSitePatterns Alpha-carbonic anhydrases signature. 127 143 IPR018338 GO:0004089|GO:0008270
Vra3g0449 274 ProSiteProfiles Alpha-carbonic anhydrases profile. 29 267 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0449 Vra-Chr3 5184589 5186532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0449 K01674 - gmx:100799362 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0449 3 5184589 5186532 Vra8g2123 8 39095095 39098820 PCT
Vra8g2122 8 39077273 39079492 Vra3g0449 3 5184589 5186532 PCT