Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2123 ATGAAGATGAATGATGAAATGAGATGCAGAGGTTTTGTTCGAAATCTGATAATGATTATGATCCTAGTCCATTCAAGAAGATGGATTAGTGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAAAGAGAGTGAGAAGGGTCCCTCACACTGGGGGGAACTGAAGAAGGAATGGGAAACATGTAAAACTGGAAAAATGCAGTCTCCAATTGATTTGTCAAGCCACAGGGTCAGGCTGGTGCCAAAGTTGGGGCAGCTAAACAAGCACTATAAGCCTCAGAATGCTACTGTCAAGAACAGAGGCCATGATATTGAGCTGAAATGGGGAGAAGATGCTGGATCATTAAACATCAATGGCAGTGAATTTTTTCTGCGTCAGTGCCATTGGCACTCACCTTCAGAACATACCATCAATGGAAGGAGGTATGACTTGGAGCTCCACATGGTTCATGAAAGAAGAAGCGAAAATGGGAAAGTGAATATTGCTGTTGTTGGTCTTCTGTTCAAGATTGGTCGACCGGATCCCATTCTCAACAAGTTGTCAAAAATCATAGAAAGCATGGTGGATAATGAAGCAGAAAAGAAAATTGGGGTGTTTGATCCCTCAGAAATTAAGTTGGGTGGGAAGAAGTATTACAGATACATTGGCTCCCTCACTGTCCCTCCTTGCACAGAAGGTGTCATTTGGACTATCAATAAAAAGATCAAAACTGTGTCCAGGGCACAAGTGAATTTACTTAGAGAGGCTGTCCACGATCATGCAGAGAAGAATTCGAGACCTGTACAAGCGCTGAATAAACGAGGGATACAACTCTATGGACCAAAACGCAAGGAATAA 843 0.4235 MKMNDEMRCRGFVRNLIMIMILVHSRRWISAQEVEDESEFDYIKESEKGPSHWGELKKEWETCKTGKMQSPIDLSSHRVRLVPKLGQLNKHYKPQNATVKNRGHDIELKWGEDAGSLNINGSEFFLRQCHWHSPSEHTINGRRYDLELHMVHERRSENGKVNIAVVGLLFKIGRPDPILNKLSKIIESMVDNEAEKKIGVFDPSEIKLGGKKYYRYIGSLTVPPCTEGVIWTINKKIKTVSRAQVNLLREAVHDHAEKNSRPVQALNKRGIQLYGPKRKE* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2123 280 CDD alpha_CA_prokaryotic_like 49 273 IPR041891 -
Vra8g2123 280 SUPERFAMILY Carbonic anhydrase 39 271 IPR036398 -
Vra8g2123 280 Pfam Eukaryotic-type carbonic anhydrase 49 272 IPR001148 -
Vra8g2123 280 ProSiteProfiles Alpha-carbonic anhydrases profile. 38 275 IPR001148 -
Vra8g2123 280 ProSitePatterns Alpha-carbonic anhydrases signature. 135 151 IPR018338 GO:0004089|GO:0008270
Vra8g2123 280 PANTHER CARBONIC ANHYDRASE 14 278 IPR023561 GO:0004089|GO:0008270
Vra8g2123 280 PANTHER ALPHA CARBONIC ANHYDRASE 3 14 278 - -
Vra8g2123 280 SMART Carb_anhydrase_2a 42 275 IPR001148 -
Vra8g2123 280 Gene3D Alpha carbonic anhydrase 36 279 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2123 Vra-Chr8 39095095 39098820 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2123 K01674 - gmx:100797935 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2123 8 39095095 39098820 Vra8g2123 8 39095095 39098820 ECH
Vra3g0449 3 5184589 5186532 Vra8g2123 8 39095095 39098820 PCT