Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2122 ATGAAGCCTTCATCAAGAATGAATAACACATGTATAGTTCCAACTTTGCTCATGCTTTGGATGGTCTTGTCAGGTTCAGCATCAACAAGAGCTGAAGAAGTGGGAGAAACTGGTAAGTATGATGTAAAAATGATTTTGTTTTTAGTGTTATTATTATGTGAGAAATGTTACTGTGCAGAGGACGAAAGAGAGTTTGATTACATGAGAGGAAGTGAAAAGGGACCTGGTCACTGGGGAGAGTTAAAGAAAGAATGGTCAGCTTGTAAACATGGACAGATGCAATCTCCCATAGACTTGTCATGTGCAAGAGTCAAAATCATCCCTCGCTGTCAACTACTCCTCACTGATTACTTTTCTTCTAATGCCACCATAATCAACAGAGGCCATGATATTGCTATATATTGGAAGGGTGATGCTGGCTCAATAGACATAAACGGAACCGAATTCTTTCTGAAACAGTGTCATTGGCACTCACCTTCTGAACATTCCATCAATGGCAGGAAGTATGACTTGGAGATGCACATGGTGCATGTAAGTATGGAAAACAAGATTTTTGTGGCTGGTGCTTTCTATAAAATAGGGCATCGCCCTGATCGTTTTCTCTCTCAGCTTGAGAAAGAAATCGAGCACCTTGTTGATGGGGATGTAGAGAGACAAATTGGAGAGATAAATCCCTCAGGAATACAGACAAGAGGAAATATGTATTACAGGTACTTAGGCTCACTCACCACTCCTCCTTGCACCGAAGGAGTCATCTGGAACATTGATAGAAAGATAAGGACAGTGTCGGAAGCACAAGTAAGACTATTGAGAGAGGCAGTGCATGATCATGCAGTGAGGAATTCAAGACCAAGGCAACCACGTAACCAAAGAGATATATTATACTTCAGATTCAAAAGCAGAGCAAAATCAAAAAAATAA 921 0.405 MKPSSRMNNTCIVPTLLMLWMVLSGSASTRAEEVGETGKYDVKMILFLVLLLCEKCYCAEDEREFDYMRGSEKGPGHWGELKKEWSACKHGQMQSPIDLSCARVKIIPRCQLLLTDYFSSNATIINRGHDIAIYWKGDAGSIDINGTEFFLKQCHWHSPSEHSINGRKYDLEMHMVHVSMENKIFVAGAFYKIGHRPDRFLSQLEKEIEHLVDGDVERQIGEINPSGIQTRGNMYYRYLGSLTTPPCTEGVIWNIDRKIRTVSEAQVRLLREAVHDHAVRNSRPRQPRNQRDILYFRFKSRAKSKK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2122 306 ProSitePatterns Alpha-carbonic anhydrases signature. 160 176 IPR018338 GO:0004089|GO:0008270
Vra8g2122 306 Gene3D Alpha carbonic anhydrase 61 304 IPR036398 -
Vra8g2122 306 CDD alpha_CA_prokaryotic_like 74 295 IPR041891 -
Vra8g2122 306 PANTHER CARBONIC ANHYDRASE 44 304 IPR023561 GO:0004089|GO:0008270
Vra8g2122 306 PANTHER EUKARYOTIC-TYPE CARBONIC ANHYDRASE 44 304 - -
Vra8g2122 306 SMART Carb_anhydrase_2a 67 297 IPR001148 -
Vra8g2122 306 Pfam Eukaryotic-type carbonic anhydrase 74 295 IPR001148 -
Vra8g2122 306 ProSiteProfiles Alpha-carbonic anhydrases profile. 63 297 IPR001148 -
Vra8g2122 306 SUPERFAMILY Carbonic anhydrase 64 294 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2122 Vra-Chr8 39077273 39079492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2122 K01674 - gmx:100784540 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2122 8 39077273 39079492 Vra3g0449 3 5184589 5186532 PCT