Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra2g0744 | ATGTCTGCAGAGGAAGAGTATACTTATGATATGAATAGCAAGACAGGACCAGATCACTGGGGAGAACTAAAACCTGAATGGAACCTATGCAAGAAGGGATCCATGCAATCCCCAATTGATTTCTCCAATGATAAGGTTAAAAAAGTAACTAATTTGGAAGAACTTCAAATCAACTATAGACCATCCAAAGCAATTATTAAAAATAGGGGCACTGATATCAAGGTGGAATGGAAAGGGAAGAAAAGCAATATAAAAATTAATGGAACTAAGTATACACTTTTACAGTCTCATTGGCATTCTCCCTCTGAACATGCCATAGATGGCACAAGGTTGGATCTAGAGTTGCACATGGTGCACCAAAGTCCATCAGGACAATATGCAGTGGTTGGAATAATGTACAGGGCTGGAATAGCAGATCCTTTCTTGTCATCGTTAAAGGAAGTCTTAGAGACCCTTTCTGATAACACTGGAGCAGAAAGAGAAGTGGCTGAACTGGATCCTAATGTGGTTATGGAACGCGCAAGCGCAGCATTTTATTACAGATATATTGGTTCTCTCACTACTCCTCCATGCTCGGAGAATGTTATTTGGACCGTCTTCAGACAGGTGAGATCAGTTTCTCAGGACCAAATCAAATTGCTTCAAGAGGCCGTTGAAGATCATGCAAGTTCCAATGCAAGACCACTGCAGCAATTGAACAACCGATTAGTGCAGTTCAATGATCCCGGAGTTAAAAATTAG | 741 | 0.4076 | MSAEEEYTYDMNSKTGPDHWGELKPEWNLCKKGSMQSPIDFSNDKVKKVTNLEELQINYRPSKAIIKNRGTDIKVEWKGKKSNIKINGTKYTLLQSHWHSPSEHAIDGTRLDLELHMVHQSPSGQYAVVGIMYRAGIADPFLSSLKEVLETLSDNTGAEREVAELDPNVVMERASAAFYYRYIGSLTTPPCSENVIWTVFRQVRSVSQDQIKLLQEAVEDHASSNARPLQQLNNRLVQFNDPGVKN* | 247 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra2g0744 | 246 | Pfam | Eukaryotic-type carbonic anhydrase | 16 | 239 | IPR001148 | - | |
| Vra2g0744 | 246 | SMART | Carb_anhydrase_2a | 9 | 239 | IPR001148 | - | |
| Vra2g0744 | 246 | CDD | alpha_CA_prokaryotic_like | 16 | 239 | IPR041891 | - | |
| Vra2g0744 | 246 | SUPERFAMILY | Carbonic anhydrase | 7 | 237 | IPR036398 | - | |
| Vra2g0744 | 246 | Gene3D | Alpha carbonic anhydrase | 3 | 243 | IPR036398 | - | |
| Vra2g0744 | 246 | PANTHER | ALPHA CARBONIC ANHYDRASE 3 | 3 | 242 | - | - | |
| Vra2g0744 | 246 | PANTHER | CARBONIC ANHYDRASE | 3 | 242 | IPR023561 | GO:0004089|GO:0008270 | |
| Vra2g0744 | 246 | ProSiteProfiles | Alpha-carbonic anhydrases profile. | 5 | 241 | IPR001148 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra2g0744 | Vra-Chr2 | 6526349 | 6528187 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra2g0744 | K01674 | - | gmx:100811978 | 305.449 |
Event-related genes