Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0338 GAGTTTGACTATGATCCTTCAAGTCCAAATGGCCCCTCTAACTGGGGAAATACGTGGCCTTTGTGTAGAGATGGAACCAGACAATCTCCTATTAACCTATTCACGGCGAATGTTGTCTTCGGTTCTGGGATTCAAAGGAACTATCAACCTGCCAACGCCACTCTTGTTACTTCCGAACATGACGTAATGATAAACTGGACTGAGAATGCAGGGAATATTATAATTAACGGAACTCAATACAACCTACTACAAGCTCATTGGCACTCTCCCTCTGAACACACAATCAACGGCATAAGGTATGATCTAGAGTTACACATGGTGCATACAAGTTTAGCTGGAAATATTGCAGTGACTGGAGTTTTATCTAGACATGGGATTCCAGATAGCTTCATTTCAACGATAGAAAATGAGTTACAGATTCTGGCTGAAAACCAGACGAGAGAAATACCAATAGGTGTTGTTGATCCAGACGATGTAGCAGGGATAACAGGAAACAAGTATTTTAGATATAATGGTTCTCTTACAGTTCCTCCTTGCAGTGAAAATGTTCTTTGGACTGTTTTCACTGGAGAGAACAAAACAGTCTCAAGGGCGCAAAAAGAGTTGATTCGAGCAGCAGTTGATGGAGCTGGTGATGAAACATTTGAGAATGCTAGACCAGTGCAACCAAGAAACGGTCGTCCAGTGAAACTCTACTTACATACAAATGGAAATTGA 717 0.4142 EFDYDPSSPNGPSNWGNTWPLCRDGTRQSPINLFTANVVFGSGIQRNYQPANATLVTSEHDVMINWTENAGNIIINGTQYNLLQAHWHSPSEHTINGIRYDLELHMVHTSLAGNIAVTGVLSRHGIPDSFISTIENELQILAENQTREIPIGVVDPDDVAGITGNKYFRYNGSLTVPPCSENVLWTVFTGENKTVSRAQKELIRAAVDGAGDETFENARPVQPRNGRPVKLYLHTNGN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0338 238 SUPERFAMILY Carbonic anhydrase 1 232 IPR036398 -
Vra4g0338 238 Pfam Eukaryotic-type carbonic anhydrase 10 230 IPR001148 -
Vra4g0338 238 ProSitePatterns Alpha-carbonic anhydrases signature. 91 107 IPR018338 GO:0004089|GO:0008270
Vra4g0338 238 ProSiteProfiles Alpha-carbonic anhydrases profile. 1 233 IPR001148 -
Vra4g0338 238 Gene3D Alpha carbonic anhydrase 1 236 IPR036398 -
Vra4g0338 238 CDD alpha_CA_prokaryotic_like 11 231 IPR041891 -
Vra4g0338 238 PANTHER CARBONIC ANHYDRASE 1 233 IPR023561 GO:0004089|GO:0008270
Vra4g0338 238 SMART Carb_anhydrase_2a 4 233 IPR001148 -
Vra4g0338 238 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0338 Vra-Chr4 6132038 6134091 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0338 K01674 - gmx:102660002 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0338 4 6132038 6134091 Vra2g0744 2 6526349 6528187 PCT