Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0873 ATGGGTTTTGTGGAACTGTTGGAGGTGGCTTCTATGCCAATTATTCAAGTCCTTCTTGTCAGTGCATTGGGAGCTTTGATGGCAACTCGGTATTTCGATAATCTTCTTTCGCCTGATATCCGGAAAGCTTTGAACAAGATTGTCTTCCTTATATTCACTCCTGCACTTATATTTTCCAGTTTCGCCAAGAGTGTTTCACTTGAAGATATGATATCATGGTGGTTTATGCCCGTTAACGTTGGACTTACCTTCTTAATTGGAGGAATCATCGGATGGATACTTGTGAAATTACTGAAGCCTAATCTGAAAGTGGAAGGTCTTATTATTGCTGCGTGTTCATCAGGAAATATGGGGAACCTTCCTCTTGTTATTGTCCCTGCTATCTGTGACGAGAAGGGAGGACCATTTGGTGAGCGTGATGTTTGCCGTAGTAATGGACTCTCTTATGCATCTTTCTCTATGGCGCTTGGTGGCATCTTCATCTGGACCTACACTTTACAGACTATAAGAAGCAGATCATTGAAATTTAAGGCACTCGAGGCTGCTGAGGTCATGAAGGTTCCCAACAAAGAGTTTGATGCTAATGCAGAAACTCTCCTTCTCAAGGATAATGACATCCAAAACACCATAGAAGTGCCCACATCTACCTATTATGGTGACACTGAAAACCAAATTCCTGTAGACCAAGTTCATCAGTCCAGTGGATCAGAGAAGACCGAATCGCTATGGCATAGAATAGTGGAAGTTATTAGTCAGTTTCTGGAAGAACTCATGTCACCACCAGCAATTGCAACATTTCTTGGTTTTCTCTTTGGTGCGGTTGCATGGCTAAGGAACCTAATAATCGGAGACAATGCTCCACTGCGTGTCATCCAAGACTCTCTCCAATTACTAGGGAATGGAACCATTCCTTGCATCACCCTTTTGCTTGGTGGTAACCTCACTCAAGTGGGCTTGAAATCATCTACTATCAAACCATTGACCCTCATCAGCATCATCATAGGCCGACTTTTCCTGCTACCTTTGATTGGACTGTTCATTGTAAAAGCAGCAGCAAACTTTGGCTTACTCCCGGTTGATCCTTTGTTTCAGTATGTGCTGGTGATGCAGTATGCCATGCCACCGGCTATGAATATCAGTACCATGGCTCAGCTGTTTGATGTAGGAAATGAAGAGTGTTCAGTTATACTACTTTGGACATATAGTGCTGCAGCCATAGCACTCACTGCTTGGTCAACATTCCTCTTGTGGGTGTTATCTTAG 1263 0.4315 MGFVELLEVASMPIIQVLLVSALGALMATRYFDNLLSPDIRKALNKIVFLIFTPALIFSSFAKSVSLEDMISWWFMPVNVGLTFLIGGIIGWILVKLLKPNLKVEGLIIAACSSGNMGNLPLVIVPAICDEKGGPFGERDVCRSNGLSYASFSMALGGIFIWTYTLQTIRSRSLKFKALEAAEVMKVPNKEFDANAETLLLKDNDIQNTIEVPTSTYYGDTENQIPVDQVHQSSGSEKTESLWHRIVEVISQFLEELMSPPAIATFLGFLFGAVAWLRNLIIGDNAPLRVIQDSLQLLGNGTIPCITLLLGGNLTQVGLKSSTIKPLTLISIIIGRLFLLPLIGLFIVKAAANFGLLPVDPLFQYVLVMQYAMPPAMNISTMAQLFDVGNEECSVILLWTYSAAAIALTAWSTFLLWVLS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0873 420 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 420 - -
Vra11g0873 420 PANTHER - 1 420 IPR045033 GO:0080162
Vra11g0873 420 Pfam Membrane transport protein 10 411 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0873 Vra-Chr11 7367415 7373142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0873 K24139 - gmx:100792072 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1708 5 23362443 23368551 Vra11g0873 11 7367415 7373142 ECH
Vra11g0873 11 7367415 7373142 Vra11g0873 11 7367415 7373142 ECH
Vra11g0873 11 7367415 7373142 Vra7g0227 7 3433400 3436613 PCT