Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0227 ATGGGGTTTTGGGAACTGTTGGAGGTGGCTTCTTCGCCAGTTATTGAAGTCCTACTTATCAGTGCAGTAGGAGTTTTTATGGCAACAGAAAATTGTAATAATCTTCTTTCACCAGACTTTAGAAAATCCTTGAACAAGGTTGTCTTCATTGCGTTCACTCCTTCACTTATATTTGCCAGTTTTGCCAAGAAAGTTTCTCTTGACGAATTGATATTATGGTGGTTTATGCCCGTTAACATTGGACTTACCTTCTTAATTGGAGGGATTCTGGGATGGATAATTGTAAAAGTACTGAAACCAAACTTGAAACTGCAAGGGCTTATTATTGCTTCTTGTTCAACAGGAAACATGGGTAATCTTCCTATTGTAATTATCCCTGCTATCTGCAATGAAAAGGGAGGTCCATTTGGTGAACTTGATGATTGCCGAAAGAGGGCTCTCTCTTATTCTTTTTGCTCTTTGGCGCTTGGTGGTGTCTTCATCTGGACCTTTACTTACCAACTAATGCGAAACACATCCTTGAGATATAAAGCATTTGAGGCTGCCGAGATCTTAAAGATGCCCAACAAAGGCCTAGATGCTGATGAAGAAACTGGCTTTCTCAAACGAAATGCCGGAGACTCAGAAAATCAAATTCTTGTAGACCAATGTGCGTCCACTGTGTCAATGAATAGTGAAACATCTTTATGGCATAGAATGACGGAAACTGTTGGTCATGTCCTGAAAGAACTAATGTCACCCCCAACAATTGCTACGTTTTTTGGTTTTCTCTTTGGTGGGGTTGAATGGCTAAGGAATCTAATAATAGGACGCGAAGCTCCACTACGAGTGATCCTAGACTCCATTCAATTACTAGGGGATGGTACAATTCCTTGTATCACTGTTTTGCTTGGAGGCAACCTTACACAAGGCATGCAGTCATCAAGTGTCCAACCCTTGGTCGTGATTTGCATCATCATAGCTCGACTAGTCTTGCTACCTGCCATTGGATTTTTTGTTGTTAGAGGGGCTGCAAATTTTGGTCTGCTCCCATTGGACCCTTTGTTTCAGTATGTGCTAGTGATTCAGTATGCCTTGCCACCTGCAATGAACATCAGCACCATGGCGCAGCTATTTGATGTAGGCACTGAAGAGTCTTCAGTTATTATCTTGTGGACATATGGTGCTGCAACTATTGCTCTCACTCTCTGGTCAACATACCTCATATGGATATTTTCTTAA 1221 0.4152 MGFWELLEVASSPVIEVLLISAVGVFMATENCNNLLSPDFRKSLNKVVFIAFTPSLIFASFAKKVSLDELILWWFMPVNIGLTFLIGGILGWIIVKVLKPNLKLQGLIIASCSTGNMGNLPIVIIPAICNEKGGPFGELDDCRKRALSYSFCSLALGGVFIWTFTYQLMRNTSLRYKAFEAAEILKMPNKGLDADEETGFLKRNAGDSENQILVDQCASTVSMNSETSLWHRMTETVGHVLKELMSPPTIATFFGFLFGGVEWLRNLIIGREAPLRVILDSIQLLGDGTIPCITVLLGGNLTQGMQSSSVQPLVVICIIIARLVLLPAIGFFVVRGAANFGLLPLDPLFQYVLVIQYALPPAMNISTMAQLFDVGTEESSVIILWTYGAATIALTLWSTYLIWIFS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0227 406 PANTHER - 1 405 IPR045033 GO:0080162
Vra7g0227 406 Pfam Membrane transport protein 11 397 IPR004776 GO:0016021|GO:0055085
Vra7g0227 406 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0227 Vra-Chr7 3433400 3436613 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0227 K24139 - gmx:100787850 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0227 7 3433400 3436613 Vra7g0227 7 3433400 3436613 ECH
Vra11g0873 11 7367415 7373142 Vra7g0227 7 3433400 3436613 PCT