Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3485 ATGTTCAGATGGAGGAGTGAGAAACACAAAGTCAAAGCTGTTTTCAAACTCCACTTCCATGTCACCCAGATGGTGCAATCTGGGGTGGAATCTTTGGTGCTTTCTATAGTTCCAGGGGACATTGGAAAGGTAACTACGAGGTTAGAGAAAGCAGCAATTCGTGGTGGAGTTTGTAGATGGGAGAATCCTGTCTATGAAACAATCAAGCTTTTTCAGGAGCCTAAGACTGGGAAATTCAGTGAGAGAGTATATTATTTTGTGGTTTCAACGGGGTTATCAAAAGCTAGCTCCTTTGGGGAAGTCTCTGTAAACTTTTCTGAGTACGCTGAGGCTACGAAACCCTCCACTGTCTCTCTTCCCATCAAGAATTCTCATTGTGAAGCCGTCTTGCATGTGACAATCCAGAGGCTGCAAGAAAATAATGATAAAAGACAGCAAGAGGATTGTGAAGATACCGAACTAAAACCCAATGATAGAAGTTTGAGGACCTACTTGAGCAATGGAGAGATAGATGCAAGCTCGAAAAGTGATTCTTCTGAAGATGTGTCTGCCAAAGCAAATGGCAATGGAGCTGAATTGAGTGCTGATTGTAGGACATCCAGTGGATCTGACATTACAACGTTAAGTTCTGATGGAAGCTCTGGACTTGACACACCCAGAGAACTAGGAGTAATAAATGGTGGCATCCACGCCAACAACAATGGTTTTCTTTCAGATGTTAGCCAGACATCTGATCCCCATAAACCTGCTGTAAATGATATTCATCAGAGATCACACTGGGACTGGTCTGGTGGTTCAGAACACAGTTTGAGTACGGATGGGTCAACAAATGGTTCTCAGGATGCTCTTCCAAGGGAAAGATCCCCTCAAACATCTGATGTGGAAATTGGAAGACTCAAGGCTGAACTCGCTGCTTTGGCCAGGCAGGTGGATGTGTCAGACTTGGAACTGCAGACACTAAGGAAGCAAATTGTAAAGGAAAGCAAAAGAGGACAGGAGCTCTCGAAGGAAATCGTTTGCGTCAAAGAGGAAAGAGATGCACTCAAGATTGAATGTGACAATCTCAGATCTTTTCATAAACGAATGGAGGAGGCCAAACTGAGTAATAGGCCACCCTTGGATAGTGGGGATCTTTGTACTCTTGTTGAAGAAATTAAACAAGAATTGAAGTTTGAAAAGGAGCTGAACGCAAATCTCCAATTACAGTTAAAGAAGACACAAGAGTCTAACGCTGATCTAGTTCTTGCTGTGCAGGACCTCGATGAAATGTTGGAGCAGAAAAATAGGGAAATGTGTAGTCTTTCCAATAAGAACGAAGAGGGTAAAATCTCCCGTGAGTCAGAGGGAAAGCTCTCTAATTCTGAAACGGATGATGAACAGAAAGAATTGGAAGAGCTAGTTAAGGAGCACAGCAATGCTCAGGAGACTCACCTACTTGAACAAAAGATTATAGATCTCTATGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGACTATGAGATATTGAAACAGGAAAACCATGATATTGCATATAAGCTGGAACAGAGTGAACTGCAAGAACAATTAAAATTACAGTATGAATGCTCTTCTCCTCCTGCTGTCGATGAAATTGATGCCCATATTCAGAATCTGGAAAATCAACTCAAGCAACAGTCAGAAGAACTCTCAAATTCTCTGGCTACCATCAAGGATCTTGGAACCCAAATCAGCAGATTAGAGGAAGAACTGGAGAAACAAGCCCAAGGGTTTGAAGCTGATCTAGATGTCGTGACACGTGCCAAAGTTGAGCAGGAGCAAAGAGCCATTCAAGCAGAAGAAGCTTTGCGAAGCACCAGACTTAAAAATGCTAACACTGCTGAGAGGCTTCAGGAAGAATTTAGAAGGCTCTCAATGCAAATGGCCTCTACATTTGATGCCAACGAGAAGGCTGCCATGAGGGCATTGACAGAAGCAAGTGAACTTCGTGTACAGAAAAGACTGGTGGAAGCAATGCTGCACAAAGTCAATGCCGAGCTTCAGTCAGCCAAAACTGATTATGAGGTAAAACTGGATGAACTTTCCAAAACAATAGACATGATGGCAGCTCAGAAACAACAGATGTTGTTGGAAATTGATGACAAGACCAAGCAGCTCGAAAATCAAAAGAAGCGTGAGGAACAAGTTAGTAGGGATTTCTATGAAGAGATCCAGATGCTAAAAGGTGAAAATGAAAGGCTTAAAGTGGAGATTTCATGCCTCTCTGAGAAAGCAGAAAAGAAAGATATCTTAAGAAATGACTTGGAACTCGTGAAGAAATCGCTTGAGGAATCTGAGGCTCGGTTAAATAGTAGAACGGTGGAAAGAAACGAGCTAGTGAGTGAAATTGATCTGTTGAAAAAGAAAGCAGAAAGGTCACTTGATGAGCTAAATAGGATGAAGCATCTCAATGATGAAAAAGAGATTGAGACTAGAGTTTTGCAGTCAGAGTTAGAAGGACTCAGAGCTCAATACAGTGACTTGAAAAGGGCCTGTTTTGAGGACGAAGCTGAGAAAGAAAATCTAAGAAAGCATGTTTTCCAGCTAAAGGGTGAACTTAAGAAGAAGGACGACGCATTAACCAACATGGAGAAGAGGTTCAAGGATAGCAATGGACGCACACAACTTTCAGATGGAACTAAACCCAATTTAAAGAACAAAAAGGGTGCTTCAATTCCTCAGAGTGCAAAAGAAATAGCAAATCTGAGGGAGAAAATAAAAACACTTGAGGACATGATAAAGTCCAAGGAAACTGCTTTGGAAATGTCAGCTTCTTCATTTTTGGAGAAGGAAAGGGAGCTCCAATCCAAAATCGAGGAACTGGAAGACAAAGTGGAGGAATTCAATCAGAGCATTGCTTTGCAAAAGGTTGATGAGGATAAGGGTATTACTACTTCAAATGATACTACAAGCGTGGCTGAGGAAAATGGTGTTGCATTGACATTGTTGAAGAGTAATGTATATTTGTCGGGGAAAGAAGCAGAAAGATCCACAATGGATGATAATGGAGATGGCAATCTTTGTGAAACTTTACCTGAATTATCGCTGTTGAAGGAAAGAAACAACTTAATGGAAACTGAGCTAAAAGAGTTACAACAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACAGTAAGAAACCTCAAGAATGCTCGGAAGGCTCAATGA 3252 0.4148 MFRWRSEKHKVKAVFKLHFHVTQMVQSGVESLVLSIVPGDIGKVTTRLEKAAIRGGVCRWENPVYETIKLFQEPKTGKFSERVYYFVVSTGLSKASSFGEVSVNFSEYAEATKPSTVSLPIKNSHCEAVLHVTIQRLQENNDKRQQEDCEDTELKPNDRSLRTYLSNGEIDASSKSDSSEDVSAKANGNGAELSADCRTSSGSDITTLSSDGSSGLDTPRELGVINGGIHANNNGFLSDVSQTSDPHKPAVNDIHQRSHWDWSGGSEHSLSTDGSTNGSQDALPRERSPQTSDVEIGRLKAELAALARQVDVSDLELQTLRKQIVKESKRGQELSKEIVCVKEERDALKIECDNLRSFHKRMEEAKLSNRPPLDSGDLCTLVEEIKQELKFEKELNANLQLQLKKTQESNADLVLAVQDLDEMLEQKNREMCSLSNKNEEGKISRESEGKLSNSETDDEQKELEELVKEHSNAQETHLLEQKIIDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKLQYECSSPPAVDEIDAHIQNLENQLKQQSEELSNSLATIKDLGTQISRLEEELEKQAQGFEADLDVVTRAKVEQEQRAIQAEEALRSTRLKNANTAERLQEEFRRLSMQMASTFDANEKAAMRALTEASELRVQKRLVEAMLHKVNAELQSAKTDYEVKLDELSKTIDMMAAQKQQMLLEIDDKTKQLENQKKREEQVSRDFYEEIQMLKGENERLKVEISCLSEKAEKKDILRNDLELVKKSLEESEARLNSRTVERNELVSEIDLLKKKAERSLDELNRMKHLNDEKEIETRVLQSELEGLRAQYSDLKRACFEDEAEKENLRKHVFQLKGELKKKDDALTNMEKRFKDSNGRTQLSDGTKPNLKNKKGASIPQSAKEIANLREKIKTLEDMIKSKETALEMSASSFLEKERELQSKIEELEDKVEEFNQSIALQKVDEDKGITTSNDTTSVAEENGVALTLLKSNVYLSGKEAERSTMDDNGDGNLCETLPELSLLKERNNLMETELKELQQRYSEMSLKFAEVEGERQKLVMTVRNLKNARKAQ* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3485 1083 Coils Coil 909 936 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 890 907 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 431 460 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 263 287 - -
Vra7g3485 1083 Coils Coil 793 848 - -
Vra7g3485 1083 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Vra7g3485 1083 Coils Coil 681 736 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 159 185 - -
Vra7g3485 1083 Coils Coil 765 789 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 258 293 - -
Vra7g3485 1083 Coils Coil 453 476 - -
Vra7g3485 1083 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 1 1083 - -
Vra7g3485 1083 Coils Coil 741 761 - -
Vra7g3485 1083 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 143 IPR019448 -
Vra7g3485 1083 Coils Coil 483 517 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 193 216 - -
Vra7g3485 1083 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1083 - -
Vra7g3485 1083 Coils Coil 546 626 - -
Vra7g3485 1083 Coils Coil 303 351 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 882 912 - -
Vra7g3485 1083 Coils Coil 941 975 - -
Vra7g3485 1083 Coils Coil 1031 1065 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 139 158 - -
Vra7g3485 1083 MobiDBLite consensus disorder prediction 139 227 - -
Vra7g3485 1083 Coils Coil 382 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3485 Vra-Chr7 54185260 54190683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3485 - - gmx:100819574 1750.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0293 11 2078794 2083928 Vra7g3485 7 54185260 54190683 PCT