Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0274 ATGAGAGCTGTTAACAACACTTTGGAGACTATCAACGCTGCTGCAACTGCCATTGCTTCGGTAGACGATCGCATTAATCAACCTCTTCCTCACGTCCAGAAGAAAACCTGGGGAAGCTGGCTGAGCATATATTGGTGTTTTGGACACCGCAAAAACCAAAAGCGAATTGGGCATGCAGTCCTTGTTCCCGTAAGCACAGCTTCTGCTGCAGATGCTACTGCTGCAGCAGTAGGTTCAACAGAAGCACCTCGTATTCCATTGCCCTTCGCCGCACCTCCCTCGTCTCCTGTATCTTTCCTCAACTCAGAACCTCCTTCTCTTGCTCAATCCCCAGGTGGTATTCTATCTCTCACTTCTGTGTCTGCCAGCATGTACTCTCCCGGTGGTCCTTTATCTATCTTCGCCATTGGACCTTATGCCCACGAACCACAATTAGTTTCACCACCCGTTTTCTCAACATTCACCACTGAACCTTCAACCGCTCCCATCACTCCACCTCCTGAATCTGTCCACTTGACAACACCTTCTTCCCCTGAAGTGCCGTTTGCTCAACTGCTTGATCCCAACAACAAAAATGCCGATACCTATCAAAGGTTCCAAATATCTCAATATGACTTCCACTCCTATCAGCTTCAACCTGGAAGCCCTGTTGGTCAACTCATTTCACCAAGATCAGCTTTCTCAGCTTCTGGCACCTCATCTCCTTTCCCTGATGCTGAGTTTTCTTCTCGTGGCTCCATCCTTCTTGACTTTCCAACGGGTGACCCTACCAAGCTTTTAAACATTGATAAACTGTCTGCTCGTGAAAAACACAAGTCACGTCAAGGCTCTGGCTCTCTCACCCCGGATTCTATACGATCCACAACTCAAGCTTCTTTTCTTCCTAGTCACTGGGTTTCTGAGGTCATAAGGTCTCCACATACAAGAAAAAATCGCCCCAATGATATTCGTGTAAATCACAGTCTCTCTATTGAAGTGTCTTCCCAGGAAGTATTGAAATCCGTGGAAAACAAGGCAGTGACATCGGCTAAATCGCTTCCATTCAAAACTGACACACCAGGACCAGAAAAAGATAATTCAAGAGAAGCCCTCGTGAGCGAAACTCACAATGATGTCCCCCAGCAGATCGCAGACGATGGAGATGTGGAAAGTGTTCATCATAAGGATGAAAGTGTGACATTTTCTTCTCCTAAAGAATTCAACTTTGATAATGCAGAAGGAGGGGATTCTCCTGGGCCGAATTTAGTTATTGAGTGGTGGGCTAATGAGAAAGTTGCAAGCAAGGAAGTAGAATCCTCCAAGAATTGGTCTTTCTTCCCGATGGGATTGGCTAATCGCCAATGA 1344 0.4643 MRAVNNTLETINAAATAIASVDDRINQPLPHVQKKTWGSWLSIYWCFGHRKNQKRIGHAVLVPVSTASAADATAAAVGSTEAPRIPLPFAAPPSSPVSFLNSEPPSLAQSPGGILSLTSVSASMYSPGGPLSIFAIGPYAHEPQLVSPPVFSTFTTEPSTAPITPPPESVHLTTPSSPEVPFAQLLDPNNKNADTYQRFQISQYDFHSYQLQPGSPVGQLISPRSAFSASGTSSPFPDAEFSSRGSILLDFPTGDPTKLLNIDKLSAREKHKSRQGSGSLTPDSIRSTTQASFLPSHWVSEVIRSPHTRKNRPNDIRVNHSLSIEVSSQEVLKSVENKAVTSAKSLPFKTDTPGPEKDNSREALVSETHNDVPQQIADDGDVESVHHKDESVTFSSPKEFNFDNAEGGDSPGPNLVIEWWANEKVASKEVESSKNWSFFPMGLANRQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0274 447 MobiDBLite consensus disorder prediction 387 413 - -
Vra11g0274 447 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 4 441 IPR040420 -
Vra11g0274 447 MobiDBLite consensus disorder prediction 344 365 - -
Vra11g0274 447 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 4 441 - -
Vra11g0274 447 MobiDBLite consensus disorder prediction 150 189 - -
Vra11g0274 447 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0274 Vra-Chr11 1927091 1929812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0274 - - pvu:PHAVU_002G158200g 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0274 11 1927091 1929812 Vra11g0274 11 1927091 1929812 ECH
Vra8g2213 8 40441884 40445305 Vra11g0274 11 1927091 1929812 ECH
Vra11g0274 11 1927091 1929812 Vra7g3520 7 54488693 54491007 PCT