Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2213 ATGGGAACAGTTAACAACACAGTCAATGCCGCGGCTTCGGCCATAGTAGCTGCCGAATCCAGAATCCAACCTGCCAGCTCGCCGAAAAAGCGCTGGGGAAGCTGCTGGAGCTTATATTGGTGTTTTGGACCCCATAAAAACAACAAGAGAATTGGCAACGCTGTCCTCGTTCCTGAACCTGTTGAACCAGTGGGTCAAGTTCGATCTCATCCTGCTACTGCTGCACCAAATCCTTCAACAGCCGTTGCCATGCCATTCGTTGTCCCTCCCTCTTCACCTGCATCTTTTCTGGAATCCGATCCTCCATCTGCTACTCAATCACCGGTTGGACTGTTCTCTCTCAGTTCTCTCAATGTCAATGCTTCTGGTGGACCTGCATCCATTTTTGCTATAGGTCCTTATACCTACGAGACCCAGTTAGTCTCACCGCCTGTATTTTCTAACTTTACCACTGAACCATCTACTGCTCCTTTCACTCCACCTCCTGAATCTGTGCAGCTGACGACACCATCATCCCCTGAGGTGCCATTTGCTCAATTATTGGAATCTTCTCTAGATCAAGATTGTAAAAGTAAAGGTACAAATCAGAGCTTTGCATTATCCAATTATGAGTTTCAACTTTATCAACAATACCATGGAAGCCCTGGCACCCAACTTATATCACCTGGATCAATCATTTCTACTTCTGGAAGTTCCACTCCTTTCCCTGATAGACACCCACTTCTTGAATTCCACAAAGGGGAAGCATCAAACCTCTTGGGCTTTGAACACTTCTCGACACATAAATTGAATTCCAGACTAGGATCAGGATCTTTGACACCAGACAGTACTGGGCAAGGTTCAGGACTAGGCTCAGGATCTTTGACACCTAATGTTGTTAAGCCAGCTTCACAACTAGGCTCTGGGTGTTTGACACCTGATGGTGCAGCACCAACTGCTGCAAATGACATCTATGTTGGAAAACCGATTTCTGAGTTAACATCCCTTGCAAATTCCGAGGACGAGTGTCAACCCAATGCAGCATTAGTCGATCACAGAGTTTCATTTGAATTGACTGGGGAGGATGTTGCACGATGTCGTCCAAATAAATCAGGGTCTCCTTTGATTGGAAACGTCTCAGGGTCTTCTGAGGATACACTGGTTGGAGAGCCTGTTGACAGAGAAAGGATACACTGTGATTTGTGTTCAAGGAAAACTTCAAATGAGAAGCCTGAAAATCCTCCTAGAGAAGGAGAAGAGCAATGCAATTCTTCCAAAGAATTTAACTTTGACAGCAGAAAAGGTGTTGTTTCTGATAATCCTGCGAATGCCTCGGAATGGTGGACTAACAAGAAAATGGTTGGAAAGGAAAGTACATCAAGCAACGGTCCGGCATTTTTTCCAATGTTACAGTCAGAAGTCGTTTAA 1407 0.4513 MGTVNNTVNAAASAIVAAESRIQPASSPKKRWGSCWSLYWCFGPHKNNKRIGNAVLVPEPVEPVGQVRSHPATAAPNPSTAVAMPFVVPPSSPASFLESDPPSATQSPVGLFSLSSLNVNASGGPASIFAIGPYTYETQLVSPPVFSNFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLESSLDQDCKSKGTNQSFALSNYEFQLYQQYHGSPGTQLISPGSIISTSGSSTPFPDRHPLLEFHKGEASNLLGFEHFSTHKLNSRLGSGSLTPDSTGQGSGLGSGSLTPNVVKPASQLGSGCLTPDGAAPTAANDIYVGKPISELTSLANSEDECQPNAALVDHRVSFELTGEDVARCRPNKSGSPLIGNVSGSSEDTLVGEPVDRERIHCDLCSRKTSNEKPENPPREGEEQCNSSKEFNFDSRKGVVSDNPANASEWWTNKKMVGKESTSSNGPAFFPMLQSEVV* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2213 468 MobiDBLite consensus disorder prediction 398 435 - -
Vra8g2213 468 MobiDBLite consensus disorder prediction 398 420 - -
Vra8g2213 468 MobiDBLite consensus disorder prediction 421 435 - -
Vra8g2213 468 MobiDBLite consensus disorder prediction 266 287 - -
Vra8g2213 468 MobiDBLite consensus disorder prediction 152 171 - -
Vra8g2213 468 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 6 467 IPR040420 -
Vra8g2213 468 MobiDBLite consensus disorder prediction 448 468 - -
Vra8g2213 468 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 6 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2213 Vra-Chr8 40441884 40445305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2213 - - ccaj:109793217 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2213 8 40441884 40445305 Vra11g0274 11 1927091 1929812 ECH
Vra8g2213 8 40441884 40445305 Vra8g2213 8 40441884 40445305 ECH