Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3520 ATGACTGATGCTAACAACACTTTCGACACTATTAACGCTGCTGCTTTTGCCATAGCCTCCTCTGCTCCCCACAACCGCCTTTCTCATCCTCCTACCCAGAAGAAAGGATGGGGAAGCTGGTTGAGCAAAATTGGGTGTTTTGGATATCAAAGAAACAGAAAGCGCATTGGACATGCGATCCTTGTTCCAGAAACAGCCACCAATGGAGCTGATCCTGCCGGAGCTGTCAGTTCAACACAAGCAGCAAGCATAACACTCCCCTTCGCCGCCCCTCCGTCATCTCCGGTATCTTTCTTTCAATCAGAACCTCCCTCAACCGCACACTCACCGGTTGGTAAAATCTCTCACACTTGTATCTCTGCCAGCATGTACTCTCCTGGTGGTCCTGCTTCGATCTTTGCCATTGGCCCTTTTGCTCATGAAACCCAATTAGTATCACCACCTGTTTTCTCAGCTTCATCCACCGCTCCTTTCACCCCACCTCCTGAATCTGTCCACTTGACCACCCCTTCTTCGCCGGAGGTTCCATTTGCTCAGCTTCTTGACCCCAACAACAGGAATTCCGACACCTTTCACCGCTTCCAAATATCTCACTACGACTTCCAGTCCTATCAGTTTCACCCCGGAAGTCCAGTTGGTCAACTCATATCACCCAGATCCGCCATCTCTGCCTCCGGCGCCTCATCGCCGCTCCCTGACTCTGAAATTAATGCCACTCTCTCCCATATTCTTGATTTCCAAAGACCAGACCCTCCCAAGCTTCTCGGCATTGATAAACTTTCTGCTTATGAAAACAGGAAGTCAAACCAAGGTTCCGAGATCAAAATGTCCCCACGTCCAAGCAACAATCGGGTTAATGAGATCAGTATAAATCATAGAGTTTCATTTGATATATCTGCCCAGAAAGTTTTGGAATCTCTGGAAAACAACCCAGCAGCATCGGCATGGACTAAGGTCATGTCGAAATTGAAAAACGATTCTCCAACAGCAGCAGACAAAGAAGATAATTTTGGAGAAACCGGGTGCAATGAGAAACAAGTCCTTGCTGAAACTCACGGTGATCAACCGCTGGAAACCAATTTGAGCGGAGATGATGCAAGAGTTCACGAGAAGGATCAGTCCTTAACTTGTGCTAAAGAATTCAATTTTGATAAAGCAGATGGAGGGGATTCTCTTGCTCCCAATATAGTTGCTGACTGGTGGGCTAATGAGAAAGTTGCAGGGAAGGAGAGAGGGGCCACCAAAGATTGGTCCTTTTTCCCAATGATTCAACCTGGTGTCAGCTAA 1287 0.4755 MTDANNTFDTINAAAFAIASSAPHNRLSHPPTQKKGWGSWLSKIGCFGYQRNRKRIGHAILVPETATNGADPAGAVSSTQAASITLPFAAPPSSPVSFFQSEPPSTAHSPVGKISHTCISASMYSPGGPASIFAIGPFAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPNNRNSDTFHRFQISHYDFQSYQFHPGSPVGQLISPRSAISASGASSPLPDSEINATLSHILDFQRPDPPKLLGIDKLSAYENRKSNQGSEIKMSPRPSNNRVNEISINHRVSFDISAQKVLESLENNPAASAWTKVMSKLKNDSPTAADKEDNFGETGCNEKQVLAETHGDQPLETNLSGDDARVHEKDQSLTCAKEFNFDKADGGDSLAPNIVADWWANEKVAGKERGATKDWSFFPMIQPGVS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3520 428 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 268 428 IPR040420 -
Vra7g3520 428 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 4 273 IPR040420 -
Vra7g3520 428 MobiDBLite consensus disorder prediction 152 175 - -
Vra7g3520 428 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 268 428 - -
Vra7g3520 428 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 4 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3520 Vra-Chr7 54488693 54491007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3520 - - gmx:100791666 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0274 11 1927091 1929812 Vra7g3520 7 54488693 54491007 PCT