Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04490 ATGATTCAAACAGATTCAGCATCTATGGCAAACACAAAAGAAAGATATGCGGTTGTTACAGGATCAAATAAAGGGATAGGATTGGAAACTGTTAAGAGATTGACTTCAAGTGGAGTCAAAGTTGTTCTTACTGCTAGAAATCAGAAGAGAGGTGTTCAAGCTTTTGAGAAATTGAAGAAGGAGTTTGGGTTTTGTTGTAATCTTGTTGTTTTTCATCAGCTTGATGTTACTGATCCGTTTAGTATTTCATCATTGGTGGAGTTTGTTAGGGATCAGTTTGGAAGACTTGATATCTTGGTGAATAATGCAGGAATCAATGGTTACAACGCAGATGAGATGATTGAACCGACTATTAATTGGAGAGAATTGAGTCAGACTTACGACATGGCTGAAAAATGCATAATAACAAATTACTACGGCGCTAAAGAAACTACCGAGGCTTTTCTTCCTCTTCTAAAGTTATCCGATTCACCAGTAATCGTAAATGTTTCCTCTACAGCAGGCCTATTAAAGTACATATCAAACGAATGGGCGAAGAATGTATTAGATGACACCGAAAATCTCACTGAAGAACTAATAGACGAAGTACTAAAAGAGTTTCTGAAAGACTTCAAGCAAGATTCACTCGAAAACAATGGTTGGCCAACCTATCTTTCTGCGTACAAACTCTCGAAAGCAGCTGTGAATTCCTACACAAGACTTCTAGCATATAGACATCCAAACTTCTGTATCAATTGTGTTTGTCCTGGTTTTGTTAAAACAGATATGAATAGAAACACAGGTGATATAACTGTTGAAAATGGTGCTGCTAGTGTTGTGAGATTAGCATTAGTTTCTTCTAGTGGTTCATGTTCTGGTCACTTTTTTGCTAGCCAAGATTTGTCTAGTTTTTTTGTAACTGTGGCTGATATATATATTTGTATGCATTTATTATATTTGTGTAGGTATGCACTAGTGACAGGAGCTAATAAAGGAATTGGTTATGGGATATGTAAGAAATTGGCATCAAATGGTGTAATTGTGGTTCTTACAGCTAGAAATGAGAAGAGAGGTTTAGATGCAGTTGAAAGCTTGAAAGAGTTAGGTCTCTCTGATTATGTGGTTTTTCATCAACTTGATGTCACTGATCCTACAAGTGTTGCTTCTTTAGCTAAGTTCATAAGAACCCGATTCCGAAAACTTGATATCTTGGTGAATAATGCTGGTGTTGCTGGTGGTATAGTGAATGGTGAGAATGTTCTTAGAAAGGTAAGAGGTGAAATATCTGATTGGAATATAGTAGTATGTCAAAATTATAAATTAGCCAAAGAATGTGTTGAAACAAACTTCTTTGGGGCTGAAAGAGTAACGGAAGCTCTTCTCCCATTGCTTCAACTATCTACTTCTCCAAGGATTGTCAATGTGTCATCTAGAACTGGACAATTGAAGAATATACCAAATGACTGGGCAAGAGCAGTGTTTGATGACATAAAAAGTCTTACAAATGAAAAACTTGGTGAAGTGCTTAGAAAGTTTTTGAAAGATTACAAAGAAGGAGCATTGGAAACCAAAAACTGGCCAACATTTCTTTCTGGTTACTCAATGGCAAAAGCAGCTTTGAATTCCTACACAAGGTTGCTAGCAATGAAGTTTCCTCATTTCCGCATAAATTGTTTATGTCCTGAGTTTGTCAAGACAGATATCAACCATAATACTGGATTTTTAAGTATTGATGAAGGTGCAGAATGTCCTGTGAAGCTAGCATTGTTGCAAGATGATGGTCCATCTGGTCTCTTTTTTCTAAGGGATGAGGTGATTTCTTTTCAATAA 1809 0.3648 MIQTDSASMANTKERYAVVTGSNKGIGLETVKRLTSSGVKVVLTARNQKRGVQAFEKLKKEFGFCCNLVVFHQLDVTDPFSISSLVEFVRDQFGRLDILVNNAGINGYNADEMIEPTINWRELSQTYDMAEKCIITNYYGAKETTEAFLPLLKLSDSPVIVNVSSTAGLLKYISNEWAKNVLDDTENLTEELIDEVLKEFLKDFKQDSLENNGWPTYLSAYKLSKAAVNSYTRLLAYRHPNFCINCVCPGFVKTDMNRNTGDITVENGAASVVRLALVSSSGSCSGHFFASQDLSSFFVTVADIYICMHLLYLCRYALVTGANKGIGYGICKKLASNGVIVVLTARNEKRGLDAVESLKELGLSDYVVFHQLDVTDPTSVASLAKFIRTRFRKLDILVNNAGVAGGIVNGENVLRKVRGEISDWNIVVCQNYKLAKECVETNFFGAERVTEALLPLLQLSTSPRIVNVSSRTGQLKNIPNDWARAVFDDIKSLTNEKLGEVLRKFLKDYKEGALETKNWPTFLSGYSMAKAALNSYTRLLAMKFPHFRINCLCPEFVKTDINHNTGFLSIDEGAECPVKLALLQDDGPSGLFFLRDEVISFQ 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04490 602 FunFam (+)-neomenthol dehydrogenase 312 601 - -
Vivi7g04490 602 Pfam short chain dehydrogenase 316 476 IPR002347 -
Vivi7g04490 602 Pfam short chain dehydrogenase 16 173 IPR002347 -
Vivi7g04490 602 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 15 294 - -
Vivi7g04490 602 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 291 IPR036291 -
Vivi7g04490 602 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 513 541 IPR020904 GO:0016491
Vivi7g04490 602 PRINTS Glucose/ribitol dehydrogenase family signature 16 33 IPR002347 -
Vivi7g04490 602 PRINTS Glucose/ribitol dehydrogenase family signature 240 257 IPR002347 -
Vivi7g04490 602 PRINTS Glucose/ribitol dehydrogenase family signature 152 168 IPR002347 -
Vivi7g04490 602 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
Vivi7g04490 602 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Vivi7g04490 602 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Vivi7g04490 602 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 221 240 IPR002347 -
Vivi7g04490 602 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 IPR002347 -
Vivi7g04490 602 Pfam Enoyl-(Acyl carrier protein) reductase 212 262 - -
Vivi7g04490 602 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 315 586 IPR036291 -
Vivi7g04490 602 Gene3D - 314 601 - -
Vivi7g04490 602 Gene3D - 5 297 - -
Vivi7g04490 602 CDD carb_red_PTCR-like_SDR_c 315 601 IPR045313 GO:0016616
Vivi7g04490 602 FunFam (+)-neomenthol dehydrogenase 10 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04490 Vivi-Chr7 115410965 115422079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04490 317 601 Miscellaneous Gene Families AT2G29150 25.260 4.07e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04490 K15095 - cave:132186563 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04490 7 115410965 115422079 Vivi7g04490 7 115410965 115422079 ECH
Vivi7g04487 7 115398528 115400942 Vivi7g04490 7 115410965 115422079 PCT
Vivi7g04490 7 115410965 115422079 Vivi7g04484 7 115385796 115387688 PCT