Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04484 ATGGCAGAAACAACAAAAAGGTATGCAGTTGTTACAGGGGCAAACAAAGGAATAGGATTTGCAGTATGCAAACCATTGGCTTCTAAAGGGATCACTGTTGTGCTTACAGCAAGAGATCAAAAGAGAGGTCTTGAAGCTGTTGACAAATTGAAGCAGCTTTCTCTTCCTGGCCTTGTGGTTTTTCATCAACTTGATGTCACAGATCCTGCAAGTATTACATCATTTGCAGATTTTATCAAGAATCAATATGGAAAACTTGATATTTTGGTAAACAATGCTGGAATTCCTGGAGTTCAAGTGGACAGTGAGGCTCTGGCTGCTGCTAAATCTGCGCAGGAAAATGGTGGCCAGATTGATTGGAGTAAAATACTAACTGATAGCTATGAACAAACTGAAGCAGGTATTAAAACAAACTACTACGGAGCCAAGGAATTAACCGAAGCACTTATTCCCCTTCTACGGCTTTCAACTTCACCAACAATTGTCAATGTTTCCTCATCCATGGGAAAGTTAGAGAAAATTCCAAATGGATGGCCTAAGGAAGTACTGAGTGATATTGAAAACCTTACTGAAGAAAAGATTGATGAAGTTTTGAACAAATTTCTAAAGGATTTTAAAGAGGGTGCAATAGTAGAAAACAAAGGCTGGCCTAGTAATATGTCTACATACATTATCTCGAAAGCTGCTCTAAGTGCCTACACAAGGGTTCTGGCTAAAAAGTTTCCATCAATATGCATCAATGCTGTTTGTCCGGGCTATGTGAAAACAGATATAAACTACAATACAGGTTATTTGACACCTGATGAAGGTGCTGAATCGATTGTGAGGTTGGCTTTGTTACCTGATGGGAGTCCTTCTGGCCACTTTTTTGTTAGAAATGAAGAGAAACCATTTTGA 897 0.3902 MAETTKRYAVVTGANKGIGFAVCKPLASKGITVVLTARDQKRGLEAVDKLKQLSLPGLVVFHQLDVTDPASITSFADFIKNQYGKLDILVNNAGIPGVQVDSEALAAAKSAQENGGQIDWSKILTDSYEQTEAGIKTNYYGAKELTEALIPLLRLSTSPTIVNVSSSMGKLEKIPNGWPKEVLSDIENLTEEKIDEVLNKFLKDFKEGAIVENKGWPSNMSTYIISKAALSAYTRVLAKKFPSICINAVCPGYVKTDINYNTGYLTPDEGAESIVRLALLPDGSPSGHFFVRNEEKPF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04484 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 296 - -
Vivi7g04484 298 Pfam short chain dehydrogenase 8 171 IPR002347 -
Vivi7g04484 298 Pfam Enoyl-(Acyl carrier protein) reductase 213 261 - -
Vivi7g04484 298 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Vivi7g04484 298 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Vivi7g04484 298 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Vivi7g04484 298 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Vivi7g04484 298 CDD carb_red_PTCR-like_SDR_c 7 298 IPR045313 GO:0016616
Vivi7g04484 298 FunFam (+)-neomenthol dehydrogenase 2 298 - -
Vivi7g04484 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 284 IPR036291 -
Vivi7g04484 298 Gene3D - 2 298 - -
Vivi7g04484 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Vivi7g04484 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 IPR002347 -
Vivi7g04484 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04484 Vivi-Chr7 115385796 115387688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04484 2 177 Acyl Lipid Metabolism Gene Families AT3G55290 27.374 2.14e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04484 K15095 K26488 gmx:100803877 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04484 7 115385796 115387688 Vivi7g04484 7 115385796 115387688 ECH
Vivi7g04484 7 115385796 115387688 Vivi7g04488 7 115398528 115400942 PCT
Vivi7g04490 7 115410965 115422079 Vivi7g04484 7 115385796 115387688 PCT