Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g04489 ATGGCAGAAGCAACAAAAAGGTATGCACTAGTGACAGGAGCTAACAAAGGAATTGGTTATGGGATATGTAAGAAATTGGCTTCAAGTGGTGTTATTGTGGTTCTTACAGCTAGAAATGAGAAAAGAGGTTTAGATGCAGTTGAAAGCTTGAAAGAATTAGGTCTCTCTGATTTTGTGGTTTTTCATCAACTTGATGTCACTGACCCTACAAGTGTTTCTTCTTTAGCCGAGTTCATCAAAACCCGATTTGGAAAACTTGATATCTTGGTGAACAACGCAGGTGTTCCCGGGGGAATAGTGAATGGAGAGAATCTTGTTAAAATGATAAGAGGTGAAATATCCGATTGGGATATAGTAGTAAGTCAAAATTATGAATTAGCCAAAGAATGTGTTGAAATAAGCTTCTTTGGTGCTGAAAGAGTAACTGAAGCTCTTCTTCCACTTCTCCAACTATCTGCTTCACCAAGGATTGTTAATGTCTCCTCTCGATGTGGTCAACTGAAGTTAATACCAAACGATCGGGCAAGAGGAGTGCTTGATGACATCAAAAGCCTTACAAATGAAAAACTTGATGAAATCCTTAAAGAGTTTATAAAAGATTACAAAGAAGGAGCATTGGAATCCAAAAACTGGCCAAAATTTGTTTCTGGTACAACAATGGCAAAAGCAGCTTTGAATTCATACACAAGGTTACTAGCAAAGAAGTTTCCTCATTTCCGCATAAATTGTGTATGTCCTGGCTTTGTCAAGACTGATATCAATGAGAATAAAGGTTTTTTAAGCATTGATGAAGGAGTACAATGTCCTGTGAATCTAGCATTGTTGCCTGATGAAGGTCCATCTGGTCTATTCTTTTTAAGAGATGAAGTGATTTCCTTTTGA 882 0.3741 MAEATKRYALVTGANKGIGYGICKKLASSGVIVVLTARNEKRGLDAVESLKELGLSDFVVFHQLDVTDPTSVSSLAEFIKTRFGKLDILVNNAGVPGGIVNGENLVKMIRGEISDWDIVVSQNYELAKECVEISFFGAERVTEALLPLLQLSASPRIVNVSSRCGQLKLIPNDRARGVLDDIKSLTNEKLDEILKEFIKDYKEGALESKNWPKFVSGTTMAKAALNSYTRLLAKKFPHFRINCVCPGFVKTDINENKGFLSIDEGVQCPVNLALLPDEGPSGLFFLRDEVISF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g04489 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 279 IPR036291 -
Vivi7g04489 293 Gene3D - 2 293 - -
Vivi7g04489 293 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 290 - -
Vivi7g04489 293 Pfam short chain dehydrogenase 8 168 IPR002347 -
Vivi7g04489 293 PRINTS Glucose/ribitol dehydrogenase family signature 149 165 IPR002347 -
Vivi7g04489 293 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Vivi7g04489 293 PRINTS Glucose/ribitol dehydrogenase family signature 269 289 IPR002347 -
Vivi7g04489 293 PRINTS Glucose/ribitol dehydrogenase family signature 218 237 IPR002347 -
Vivi7g04489 293 PRINTS Glucose/ribitol dehydrogenase family signature 237 254 IPR002347 -
Vivi7g04489 293 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Vivi7g04489 293 FunFam (+)-neomenthol dehydrogenase 2 293 - -
Vivi7g04489 293 CDD carb_red_PTCR-like_SDR_c 7 293 IPR045313 GO:0016616
Vivi7g04489 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Vivi7g04489 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 IPR002347 -
Vivi7g04489 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 218 237 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g04489 Vivi-Chr7 115409221 115410714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g04489 10 258 Acyl Lipid Metabolism Gene Families AT1G24360 22.222 7.13e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g04489 K15095 - gmx:100802560 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g04489 7 115409221 115410714 Vivi7g04489 7 115409221 115410714 ECH
Vivi7g04489 7 115409221 115410714 Vivi7g04492 7 115467867 115471391 PCT
Vivi7g04494 7 115474538 115476124 Vivi7g04489 7 115409221 115410714 PCT