Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05473 ATGGACACTGTCACAAGCATGGTAGGTGAAAAGCCAGTGGTGATATTCAGCAAGAGCACTTGTTGTTTGAGCCATTCTGTAACATCACTGATGCGTAGCTTTGGAGCCAACCCTATTGTTTATGAGCTCGATAAGATCGCAAACGGTTCGCAGATTGAGAGTGAGTTGCTTCAAATGGGGTGCAAACCAAGTGTGCCTGCTGTTTTCATAGGACAACAGTTCAGAGGTGGTTCTAAGAAAATTATGAGTCTTCATGTGAGGAATGAGTTAGTACCTATGTTGAAGGAGGCTGGTGCTATTTGGATTTGA 309 0.4369 MDTVTSMVGEKPVVIFSKSTCCLSHSVTSLMRSFGANPIVYELDKIANGSQIESELLQMGCKPSVPAVFIGQQFRGGSKKIMSLHVRNELVPMLKEAGAIWI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05473 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Vivi6g05473 102 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Vivi6g05473 102 CDD GRX_GRXh_1_2_like 12 93 - -
Vivi6g05473 102 Gene3D Glutaredoxin 1 101 - -
Vivi6g05473 102 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Vivi6g05473 102 Pfam Glutaredoxin 13 74 IPR002109 -
Vivi6g05473 102 NCBIfam glutaredoxin-like family 4 102 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05473 Vivi-Chr6 160357078 160357716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05473 1 102 Miscellaneous Gene Families AT4G15690 53.922 3.64e-41 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05473 K03676 - gmx:100789514 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05473 6 160357078 160357716 Vivi1g05263 1 114973117 114973443 PCT
Vivi1g05250 1 114253199 114253862 Vivi6g05473 6 160357078 160357716 PCT