Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05263 ATGGATACAGTAGCAGCATTGACAGCTGATAAGCCAGTGGTGATATTCAGCAAGAGCAGTTGTTGCATGGCGCATTCGGCGAAAGCTCTGATAAGCAGCTTTGGTGCCAACCCTATAGTTATTGAGATTGACAAAATGGTAAATGGTGATGAAATAGAGAGGTCATTGATTCAACTTGGTTGTAGACCAAGTGTGCCAGCAGTTTTCATAGGACAACAATATATAGGTGGTGTTAATCAAGTGATAAGCCTGAATGTCCAAAACAAGCTTGCTCAGTTGCTTTTAAAGGCTAGAGCTATTTTCATATGGGGTCCAATAGCTTCATGA 327 0.4128 MDTVAALTADKPVVIFSKSSCCMAHSAKALISSFGANPIVIEIDKMVNGDEIERSLIQLGCRPSVPAVFIGQQYIGGVNQVISLNVQNKLAQLLLKARAIFIWGPIAS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05263 108 NCBIfam glutaredoxin-like family 5 101 IPR011905 -
Vivi1g05263 108 Pfam Glutaredoxin 13 75 IPR002109 -
Vivi1g05263 108 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Vivi1g05263 108 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Vivi1g05263 108 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Vivi1g05263 108 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Vivi1g05263 108 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
Vivi1g05263 108 CDD GRX_GRXh_1_2_like 12 93 - -
Vivi1g05263 108 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Vivi1g05263 108 Gene3D Glutaredoxin 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05263 Vivi-Chr1 114973117 114973443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05263 1 102 Miscellaneous Gene Families AT4G15690 48.039 3.53e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05263 K03676 - gmx:106794948 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05263 1 114973117 114973443 Vivi1g05263 1 114973117 114973443 ECH
Vivi6g05473 6 160357078 160357716 Vivi1g05263 1 114973117 114973443 PCT
Vivi1g05263 1 114973117 114973443 Vivi6g05472 6 160332481 160333675 PCT