Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi6g05137 | ATGGAATTGGTTTCTGAATCAACAAACCAAAATGGAAGTGAAAATGGTATCAAGAGTAACAGATATGAGTGCCAAAAGAGAAGAGATTGGAACACATTCTGCCAATACTTGAGAAACCATAGACCACCACTTTCTGCTTCCATGTGTAATGGATCACATGTTCTTGAGTTTCTTCACTACCTTGATCAATTTGGGAAGACCAAAGTTCATAATCCAAATTGTCCTTTCTTTGGAATGCCAACTCCTCCAGCTCCATGTCCTTGTCCTCTCCGTCAGGCGTGGGGAAGCCTCGACGCACTTATCGGTCGCCTTCGCGCGGCTTATGATCAAGCGGTTAATGGTGGGAATCATGTTAATCCATTTGGTGATGGTGCTGTTAGGTTTTATTTGCGCGATGTTCGTGATTTTCAGTCGAAGGCTCGAGGAGTTAGCTACCATAAGAAGAGGAAGAGACCTAATCGCAACATCGCCGCACCTCAATCATCATCGTAA | 492 | 0.4411 | MELVSESTNQNGSENGIKSNRYECQKRRDWNTFCQYLRNHRPPLSASMCNGSHVLEFLHYLDQFGKTKVHNPNCPFFGMPTPPAPCPCPLRQAWGSLDALIGRLRAAYDQAVNGGNHVNPFGDGAVRFYLRDVRDFQSKARGVSYHKKRKRPNRNIAAPQSSS | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi6g05137 | 163 | PANTHER | PROTEIN G1-LIKE2 | 13 | 154 | IPR040222 | - | |
| Vivi6g05137 | 163 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Vivi6g05137 | 163 | Pfam | ALOG domain | 17 | 135 | IPR006936 | - | |
| Vivi6g05137 | 163 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
| Vivi6g05137 | 163 | ProSiteProfiles | ALOG domain profile. | 21 | 149 | IPR006936 | - | |
| Vivi6g05137 | 163 | MobiDBLite | consensus disorder prediction | 142 | 163 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi6g05137 | Vivi-Chr6 | 155511767 | 155513698 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi6g05137 | - | - | gmx:102663941 | 224.557 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vivi6g03858 | 6 | 134270202 | 134271943 | Vivi6g05137 | 6 | 155511767 | 155513698 | ECH | |
| Vivi1g06141 | 1 | 136988854 | 136990251 | Vivi6g05137 | 6 | 155511767 | 155513698 | ECH | |
| Vivi6g05137 | 6 | 155511767 | 155513698 | Vivi6g05137 | 6 | 155511767 | 155513698 | ECH | |
| Vivi6g05137 | 6 | 155511767 | 155513698 | Vivi1g06556 | 1 | 151003046 | 151004448 | PCT |