Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06556 ATGGATTCAATTCAAGATTTTATGGACTCATGTAACTCTGAAAACACTTGCAGCCTCAACAACAGCACCATCACCACCAACAACAACAACAGCACCAACAACAACACCACCACCTTAATCTGCACCTCTTCTCCTTCTGGCTCCACCACCACCAGCAGCCGCTATGAAAACCAGAAACGCCGTGACTGGAACACTTTTGGACAGTACCTCAAGAATCACCGCCCTCCTCTCTCCCTCTCCAGATGCAGCGGTGCACATGTCCTTGAATTTCTCCGGTACTTGGATCAATTTGGCAAAACAAAAGTGCACACACCAATTTGTCCATTCTATGGCCACCCAAACCCACCAGCACCATGTCCATGTCCATTAAGACAAGCTTGGGGAAGCCTTGATGCACTGATAGGTCGATTAAGAGCAGCTTTTGAAGAGAATGGAGGAAAACCAGACACAAATCCATTTGGTGCAAGAGCTGTTAGGCTTTACCTTCGCGAAGTTCGTGATCTTCAATCGAAAGCAAGAGGTATTAGCTACGAGAAGAAGAAAAGAAAGCGTCCACCACAACAGCAACAACATCAGCATCAGCAGCAACAACAGCATCAGCATCAGCATCAACAGCTTCAACAATTGCCAATGCAATTGCCTCTTCATCTTTGTCATCATCAACACCAGCTTCCACCTCCAGGTGCAACTCAATGA 696 0.4655 MDSIQDFMDSCNSENTCSLNNSTITTNNNNSTNNNTTTLICTSSPSGSTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPDTNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQQQHQHQQQQQHQHQHQQLQQLPMQLPLHLCHHQHQLPPPGATQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06556 231 MobiDBLite consensus disorder prediction 189 206 - -
Vivi1g06556 231 MobiDBLite consensus disorder prediction 25 57 - -
Vivi1g06556 231 ProSiteProfiles ALOG domain profile. 54 181 IPR006936 -
Vivi1g06556 231 MobiDBLite consensus disorder prediction 25 54 - -
Vivi1g06556 231 PANTHER PROTEIN G1-LIKE2 26 204 IPR040222 -
Vivi1g06556 231 Pfam ALOG domain 48 167 IPR006936 -
Vivi1g06556 231 MobiDBLite consensus disorder prediction 172 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06556 Vivi-Chr1 151003046 151004448 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06556 - - gmx:100803605 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05137 6 155511767 155513698 Vivi1g06556 1 151003046 151004448 PCT
Vivi1g06556 1 151003046 151004448 Vivi6g03858 6 134270202 134271943 PCT