Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi6g03858 | ATGGATTCAATTCAACAATTTATACAGACATGTAACCATGAAAACACCTGCAACTTCATGAACACAATAAGCAGCAACAACAACACAAGCTTAACAACAACTACAGCAACAACAACAGCAAGTGGAAGCTCTTCTTCATCTGCAGCTTCAACCATAACAACCAACACACCAAACAGTAGCAGCCGGTATGAGAATCAGAAACGCCGTGACTGGAACACTTTTGGTCAGTACCTCAAGAATCATCGTCCTCCTCTTTCGCTATCTCGATGCAGCGGTGCTCATGTGCTTGAATTTCTCAGGTATTTGGATCAATTTGGGAAAACAAAAGTTCACACACCAATTTGTCCATTTTATGGGCATCCAAACCCTCCAGCACCATGTCCATGTCCTCTAAGGCAAGCATGGGGAAGCCTAGATGCACTGATAGGCCGTCTCCGCGCCGCTTTCGAAGAAAATGGAGGAAAACCAGAAACAAATCCTTTTGGTGCTCGAGCAGTGAGGCTCTATCTCCGCGAAGTTCGCGATCTTCAATCCAAAGCAAGAGGGATTAGTTATGAGAAAAAGAAGAGAAAACGTCCTCCACCACCACAACCACGGCCACAGCAACAAGTTCCACCACCACAAGGTGCAAGTGCAGCTCATTAG | 645 | 0.4558 | MDSIQQFIQTCNHENTCNFMNTISSNNNTSLTTTTATTTASGSSSSSAASTITTNTPNSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPPQPRPQQQVPPPQGASAAH | 214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi6g03858 | 214 | ProSiteProfiles | ALOG domain profile. | 62 | 189 | IPR006936 | - | |
| Vivi6g03858 | 214 | PANTHER | PROTEIN G1-LIKE2 | 37 | 197 | IPR040222 | - | |
| Vivi6g03858 | 214 | Pfam | ALOG domain | 53 | 175 | IPR006936 | - | |
| Vivi6g03858 | 214 | MobiDBLite | consensus disorder prediction | 33 | 62 | - | - | |
| Vivi6g03858 | 214 | MobiDBLite | consensus disorder prediction | 179 | 214 | - | - | |
| Vivi6g03858 | 214 | MobiDBLite | consensus disorder prediction | 33 | 66 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi6g03858 | Vivi-Chr6 | 134270202 | 134271943 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi6g03858 | - | - | ccaj:109797167 | 281.952 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vivi6g03858 | 6 | 134270202 | 134271943 | Vivi6g03858 | 6 | 134270202 | 134271943 | ECH | |
| Vivi6g03858 | 6 | 134270202 | 134271943 | Vivi6g05137 | 6 | 155511767 | 155513698 | ECH | |
| Vivi6g03858 | 6 | 134270202 | 134271943 | Vivi1g06141 | 1 | 136988854 | 136990251 | ECH | |
| Vivi1g06141 | 1 | 136988854 | 136990251 | Vivi6g03858 | 6 | 134270202 | 134271943 | ECH | |
| Vivi6g03858 | 6 | 134270202 | 134271943 | Vivi4g04186 | 4 | 167656002 | 167658402 | PCT | |
| Vivi1g06556 | 1 | 151003046 | 151004448 | Vivi6g03858 | 6 | 134270202 | 134271943 | PCT |