Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02300 ATGATATTTTCATTTGATTCCCCACCTTCCATTCATCATAAATACGTCTATCAATCTTCAACAAAAGAATCATCTTCATCCACGACCATGTTCATCCAATTCTCCATCCTCTTCCTCCTCTTCACTACTCCCTCCACACCTTTAATCAAAGCAGAACAAGATCCCAACAATTTTGTGCGTTCATTAGACCTCAAAGAACTAAACTTGGATAATAAACAAGAGAAGCTAAGCCATTTGAAATTCTATTGGCATGACATAGTTAGTGGAAACAACCCTTCTTCAATGGAGATTGTTCCACCACCTTTGATAAACTCAACCACTGCCTTTGGTTTAGTTAACATGATTGAGAACCCTTTAACCTTAGGACCTCAATTAAGTTCCAAGTTGGTTGGAAAAGCACAAGGATTCTATGCATCAACATCACAAAGTGAAATAGACCTTATTATGGCTATGAATTTTGCTATCATTGAAGGGAAGTATAATGGTAGCACCATCACTATTTTGGGGAGGAACCCTATTTATGATAAGGTTAGGGAAATGCCTATAATTGGTGGAAGTGGTCTTTTCCGATTTGCTAGAGGTTATGCTCAACTTAGAACTCATTGGTTTTCATCGAAGACAAAGGATGCTATAGTTGAGTACAATATTTATGTGTTACATTATTAA 666 0.3679 MIFSFDSPPSIHHKYVYQSSTKESSSSTTMFIQFSILFLLFTTPSTPLIKAEQDPNNFVRSLDLKELNLDNKQEKLSHLKFYWHDIVSGNNPSSMEIVPPPLINSTTAFGLVNMIENPLTLGPQLSSKLVGKAQGFYASTSQSEIDLIMAMNFAIIEGKYNGSTITILGRNPIYDKVREMPIIGGSGLFRFARGYAQLRTHWFSSKTKDAIVEYNIYVLHY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02300 221 Gene3D - 65 218 IPR044859 -
Vivi6g02300 221 Pfam Dirigent-like protein 77 218 IPR004265 -
Vivi6g02300 221 PANTHER NUCLEOPORIN-RELATED 65 217 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02300 Vivi-Chr6 101866151 101867131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02300 - - gmx:100796078 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02300 6 101866151 101867131 Vivi5g00426 5 6326060 6326873 PCT
Vivi5g00425 5 6312996 6313829 Vivi6g02300 6 101866151 101867131 PCT