Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00426 ATGTCATCCCAACATTTTCTCACTCTTCTCTTCTTCCTTCTCCTCTCTTGCAACACCATCACTTCCTCAACATCATCATCACAAAATGATGACACTTTCGACTTTGTTCGTCCAATAGATCGCAAATTATTAGGCCTAAACAAAATGGAAAAGCTAAGTCATTTAAAATTCTATTGGCATGACATAATGACTGGAAAAAACCCAACTTCATTCGCAGTTGTTCCATCACCTTTGAAGTTGAACTCAACCTTTTCTTTTGGTTTAGTCACCATGATGGATGACCCTTTGACTTTAGGACCCGAATTGAGTTCCAAACTTGTTGGAAAATGTCAAGGTTTGTATGCTTCTACATCACAGGATAGTTTTTCTTTTCTCATGGCTATGAATTTGGCTTTATTTGAAGGAGAGTATAATGGAAGTAGTATTACTATCATGGGGAGGAATCCTGTTTTTGATAAGGTTAGAGAGGTGCCTGTTGTTGGTGGGAGTGGAGTTTTCAGATTTGCTAGAGGCTATGCTCAACTTACTACTTATTCGTATGATCCCAAAAATGCAATTGCTGTTGTTGAGTACAATGTTTATGTTTCTCACTAA 594 0.3754 MSSQHFLTLLFFLLLSCNTITSSTSSSQNDDTFDFVRPIDRKLLGLNKMEKLSHLKFYWHDIMTGKNPTSFAVVPSPLKLNSTFSFGLVTMMDDPLTLGPELSSKLVGKCQGLYASTSQDSFSFLMAMNLALFEGEYNGSSITIMGRNPVFDKVREVPVVGGSGVFRFARGYAQLTTYSYDPKNAIAVVEYNVYVSH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00426 197 PANTHER NUCLEOPORIN-RELATED 41 194 IPR004265 -
Vivi5g00426 197 Pfam Dirigent-like protein 53 195 IPR004265 -
Vivi5g00426 197 Gene3D - 42 193 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00426 Vivi-Chr5 6326060 6326873 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00426 - - psat:127107764 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02300 6 101866151 101867131 Vivi5g00426 5 6326060 6326873 PCT