Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00425 ATGTCATCCCAACATTTTCTCACTTTGCTCTTCTTCCTTCTCCTGTCATGCAACACCATAACTTCTTCAACATCATCATCACAAAATGATGACACTTTCGACTTTGCTCGACCAATAATAGATCGCAAATTGTTAGGCCTAAACAAGATGGAAAAACTAAGTCATTTAAAATTCTATTGGCATGACATAATGACTGGAAAAAACCCAACATCATTCAATGTTGTTCCATCACCTTTGAAGTTGAACTCAACCTTTGCTTTTGGTTTAGTCACCATGATGGACGACCCTTTGACTTTAGGACCCGAATTGAGTTCCAAACTTGTTGGAATATGTCAAGGTTTTTATGCGTATGCATCACAGGATAGTTTAGCTTTTCTCATGGCTATGAACTTTGCTTTCGTTGAAGGAAAGTATAATGGAAGTAGTATTACTATCTTGGGGAGGAATCCTGCTATGAATAAGGTTAGAGAGATGCCTGTTGTTGGTGGGAGTGGACTCTTCAGATTTGCTAGAGGATATGCTCAACTTTCTACTTATTCTTTTGATCCCAAAAATGCAATTGCTGTTGTTGAGTACAATGTTTATGTTTCTCACTAA 597 0.3752 MSSQHFLTLLFFLLLSCNTITSSTSSSQNDDTFDFARPIIDRKLLGLNKMEKLSHLKFYWHDIMTGKNPTSFNVVPSPLKLNSTFAFGLVTMMDDPLTLGPELSSKLVGICQGFYAYASQDSLAFLMAMNFAFVEGKYNGSSITILGRNPAMNKVREMPVVGGSGLFRFARGYAQLSTYSFDPKNAIAVVEYNVYVSH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00425 198 PANTHER NUCLEOPORIN-RELATED 42 195 IPR004265 -
Vivi5g00425 198 Pfam Dirigent-like protein 54 196 IPR004265 -
Vivi5g00425 198 Gene3D - 44 194 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00425 Vivi-Chr5 6312996 6313829 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00425 - - psat:127107764 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g00425 5 6312996 6313829 Vivi6g02300 6 101866151 101867131 PCT