Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g04332 ATGAGACTAAGAATTTGCAGTACACAGTTGCAAGCTCTAACACAAGAGACAGAAACTCTTGTTAAACAAGCTGTTAACCTAGCAACAAGAAGAGGTCATTCACAAGTGACTCCTCTTCATCTTGCAACTGTCATGCTTTCAAATTCCACTAGCCTTCTCCACAAAGCATGTCTCCAATGCCATTCTCATCCCCTCCAATTCAAAGCACTGGAGATTTGCTTCAATGTTTCTCTCAACCGTTTGCCGACATCGACGTTATCAAGTCCTCTTTTGAGTAGTCCTCAATATTCATCGCCTTCACTTTCAAATTCCTTAATCGCAACGTTCAAACGCGCTCAAGGTCACCAACGTCGCGCTACTTCTATTGAGAGCCAGCAACAGTCTATTTTGGCCTTGAAGATTGAGATTGGACAGTTGATAATATCTATTCTTGATGATCCTTGTATTAGTAGAGTTATGAGAGAAGCTGGTTTCTCTAGTTTACTTGTTAAAACCAAGGTGGAAGAAGCACTTTTAAGCCAGTCCAAGGACAACAACACTTATAAGCCACAAGCTTATGGTGCTAATAATAGTGTGTCCTCATCTAGATCTTTTGATCAACTTGATGGTTCTATAGACCATTTTGCAACTTGTGTTGGTAGCCTCAACCTTACTTTAAGTCTTGATAGTAATTTTCAAGCTCAGGAGAGAAGCAAAGTGAAATTCAAGGATGAATCTTTTGAAGATGGTGTCAAAGTGAACAAGCATATAGCTTTGCCAACATGGCTTCAAAATTGCAAGGAGGAGAGAGTTCAAGCAACGGAAAATCAGAAAAATGCAAAGCAGTGGAAAAAAGAATGTGAGTTATACACTGAGACTGAGAGTGAGAATATCAGTGATAATTGCCATGAAGGAAATTTAATAATGTTCATGCCACAAACTGTCCCTAAGCAAGACTTTTTGTCAAATCCAAACTCTAGTCCCAACTCAGCTTCTTCAAGTGAAGAATTTGATGGTTTGAAGAGCTCACAAATGTTGAATGAACTCAATGATGAGAACATGAAGATTTTATGTGAAGCATTGGAGAAAAAGGTTCCAAATCAAAAGAAAACATTAACTAAGGAGATTGCAAGCACTGTCCTTCTTTGCAGGTCAGGAATGAGAAAAGGAGGAGACAAAGACAACTACTTAGTGAAGAGAGATGGTAAACAAGAAACATGGATGTTGTTTCTAGGTGATGATTCTCAAGCTAAAGAGTTAATCTCAAAAGAGCTAGCAAAAGTTGTTTTTGGCTCTTACAATGACTTTGTCACCATTGGTATAAGTAGTTTCTCTTGCAAAGGAAGTGAGGAATCCAAAAAGAAAAGGCTAAGAGATGAGTTTGGTAGTAGTTATATACAAAGATTTGGTGAAGCAGTGAATGAGAATCCTCATAGGTTGTTCTACATGGAAGATTTTGAGCAAGTTGATTACTTTACTCAAAAGGGTATTAGAAAAGCAATTGAAAATGGATGTTTAACACTTCCTTGTGGAGGTGAATTTGTATCTCTCAAGGATGCTATTGTCATTTTCAGCTGTGAAACAGCTTCTTCATATGTTGATAAGTTGGAGGAGAAAAAAACATGCCTCTCTTTGGATCTCAACATAGCTATTGGAGTTGATGAACAAAATGTGTATTTAAATGGAGACTTTGGGATCCTAGAATTAGTTGATAAACAAATTAACTTTGAAACACAAGAACAAACATGTTAG 1731 0.3749 MRLRICSTQLQALTQETETLVKQAVNLATRRGHSQVTPLHLATVMLSNSTSLLHKACLQCHSHPLQFKALEICFNVSLNRLPTSTLSSPLLSSPQYSSPSLSNSLIATFKRAQGHQRRATSIESQQQSILALKIEIGQLIISILDDPCISRVMREAGFSSLLVKTKVEEALLSQSKDNNTYKPQAYGANNSVSSSRSFDQLDGSIDHFATCVGSLNLTLSLDSNFQAQERSKVKFKDESFEDGVKVNKHIALPTWLQNCKEERVQATENQKNAKQWKKECELYTETESENISDNCHEGNLIMFMPQTVPKQDFLSNPNSSPNSASSSEEFDGLKSSQMLNELNDENMKILCEALEKKVPNQKKTLTKEIASTVLLCRSGMRKGGDKDNYLVKRDGKQETWMLFLGDDSQAKELISKELAKVVFGSYNDFVTIGISSFSCKGSEESKKKRLRDEFGSSYIQRFGEAVNENPHRLFYMEDFEQVDYFTQKGIRKAIENGCLTLPCGGEFVSLKDAIVIFSCETASSYVDKLEEKKTCLSLDLNIAIGVDEQNVYLNGDFGILELVDKQINFETQEQTC 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g04332 576 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 520 IPR027417 -
Vivi4g04332 576 Gene3D - 9 174 IPR036628 -
Vivi4g04332 576 MobiDBLite consensus disorder prediction 310 333 - -
Vivi4g04332 576 Gene3D - 324 552 IPR027417 -
Vivi4g04332 576 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 177 - -
Vivi4g04332 576 ProSiteProfiles Clp repeat (R) domain profile. 10 174 IPR004176 -
Vivi4g04332 576 SUPERFAMILY Double Clp-N motif 13 118 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g04332 Vivi-Chr4 170012041 170014258 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g04332 - - vvo:131600254 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g04332 4 170012041 170014258 Vivi3g04315 3 77429251 77434148 ECH
Vivi4g04332 4 170012041 170014258 Vivi4g04332 4 170012041 170014258 ECH
Vivi4g04332 4 170012041 170014258 Vivi3g04995 3 96369382 96374888 ECH