Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06804 ATGAAATCGTTACTCCAAATCCAACCTTTAACCATATTAATTTCATTCTGTGCAATTTCACTCTTTATATTGATTTCCATACTATTCTTTACCCCATCAAAGATACCAGAACTGGACATTGGTAGTTCTTTACAACAAACTACTGATTCTGATCCAACTGATGTTAACCATCTTGTCTTCGGAATCGCTTCAACCGGAAATTCATGGGCTAACAGGAAAAAATATGTCAAACTATGGTGGAGGAAAAAAATGAAAGGTTGTGTTTTTGTGGATAATCTTCCACCGGAAGGAAATCATACTGATGATTCTGTTCCTCCTCTTTGTGTCTCTGAGGACACTTCGAAGTTTCATTACACTTTTAAAGGTGGTTTAAGATCAGCAATTCGCGTGGCGCGTGTTGTGAAAGAGATTGTTGGGTTGAATAATAATTCTAATGTTAGGTGGTATGTGTTTGGTGATGATGACACAATTTTCTTTCCTGAGAATCTTGCTAAGACTCTTTCTAAATATGATCATAGGCTTTGGTACTACGTTGGTGCTTACTCCGAGAATTACGAAGGGTCTTATGTTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCTATAAGTGCTTCTTTAGCAAATGTTTTATCTAAAGTTTTTGATTCTTGTATTGAGAGATATTCTCATCTTTATGGAAGTGATGCTAGGGTGTTCTCTTGCATAGCTGAACTTGGTGTTGGATTAACATATGAACCTGGTTTTCATCAGGTTGATTTAAGCGGAAATATCTTTGGATTACTGGCTGCGCATCCATTAAGTCTCTTGTTATCGTTACATCATCCCGAACTCGTTGAACCAATCTTTCCTCAAATGACAGTTTCAAATTCACTGCAACATTTATTTGAAGCTGCAAATGTTGATTCACAGAGGATCCTACAACAAACAGTTTGTTACGATAAACAATTTTCGCGGACAATTTCAGTATCATGGGGCTACGCTGTTCAAGTATTCCAAAACAATGAACTTTTACCGAATATTCTGAGAGTTCGAGAAACATTCAAACCATGGAGGGAAAACTGGCCTTTTGCCGGAGTATATACATTTAGTACAACCAAAGTTCATCCGGATCCTTGCGAAAGACCTATGATTTTCTATCTAGACAATATATCTTCGGGTAAATATGGTGGTATTGTTAGCAACTATACGAAATCTTTTCGAGATTGTTCCAACAATAATACATCATTGAAGAATCTGGAGGTGATTAAAGTAGTCACAAAAAAGTTAGACCTTGACGCCAAACAGTTGCAGAGTCCAAGAAGACAGTGTTGTGATGTGCACTCAAACTCTAGTCAACTCTTGGAAATTGCAATTCGAGAGTGCAGATATGAAGAATTGATTTATCTGCATTGA 1398 0.3712 MKSLLQIQPLTILISFCAISLFILISILFFTPSKIPELDIGSSLQQTTDSDPTDVNHLVFGIASTGNSWANRKKYVKLWWRKKMKGCVFVDNLPPEGNHTDDSVPPLCVSEDTSKFHYTFKGGLRSAIRVARVVKEIVGLNNNSNVRWYVFGDDDTIFFPENLAKTLSKYDHRLWYYVGAYSENYEGSYVFGFGMAFGGGGFAISASLANVLSKVFDSCIERYSHLYGSDARVFSCIAELGVGLTYEPGFHQVDLSGNIFGLLAAHPLSLLLSLHHPELVEPIFPQMTVSNSLQHLFEAANVDSQRILQQTVCYDKQFSRTISVSWGYAVQVFQNNELLPNILRVRETFKPWRENWPFAGVYTFSTTKVHPDPCERPMIFYLDNISSGKYGGIVSNYTKSFRDCSNNNTSLKNLEVIKVVTKKLDLDAKQLQSPRRQCCDVHSNSSQLLEIAIRECRYEELIYLH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06804 465 FunFam Fringe-related protein-like 45 301 - -
Vivi2g06804 465 Pfam Protein of unknown function, DUF604 189 439 IPR006740 -
Vivi2g06804 465 Gene3D - 46 275 - -
Vivi2g06804 465 PANTHER FRINGE-RELATED 13 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06804 Vivi-Chr2 207191356 207193770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06804 42 465 Glycosyltransferase AT4G15240 51.059 7.44e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06804 - - vvo:131651172 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06804 2 207191356 207193770 Vivi2g06804 2 207191356 207193770 ECH
Vivi2g06804 2 207191356 207193770 Vivi5g01837 5 68467851 68470970 PCT
Vivi5g01839 5 68534154 68537117 Vivi2g06804 2 207191356 207193770 PCT